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PyDISH No: 12301

PDB: 6dho,
chainID: v, resSeq: 201
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.07 Å

axial ligand #1: HIS

chainID: v,
resSeq: 41,
Coordination distance[Å]: 2.022
molecule: Cytochrome c-550
Organism: Thermosynechococcus elongatus (strain BP-1)

axial ligand #2: HIS

chainID: v,
resSeq: 92,
Coordination distance[Å]: 2.048
molecule: same as ligand #1

List of other hemes in pdb:6dho

ID of heme Distortion Axial ligands on heme Function & structure
6dho-E-101
sad. +1.01
ruf. -0.03
dom. -0.02
bre. +0.10
HIS chainID: E,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 40
pocket vol.: 435.0 Å3
d(Fe-oop): 0.059 Å
HIS chainID: F, resSeq: 24,
molecule: Cytochrome b559 subunit beta
6dho-V-201
sad. +0.39
ruf. -0.46
dom. -0.01
bre. -0.01
HIS chainID: V,
resSeq: 41,
molecule: Cytochrome c-550
electron transporter
oligomeric count: 40
pocket vol.: 449.0 Å3
d(Fe-oop): 0.071 Å
HIS chainID: V, resSeq: 92,
molecule: Cytochrome c-550
6dho-e-102
sad. +0.98
ruf. -0.10
dom. -0.03
bre. +0.11
HIS chainID: e,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 40
pocket vol.: 425.0 Å3
d(Fe-oop): 0.042 Å
HIS chainID: f, resSeq: 24,
molecule: Cytochrome b559 subunit beta