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Protein data
function: oxidoreductaseexperiment: ELECTRON MICROSCOPY
resolution: 3.5 Å
axial ligand #1: HIS
chainID: R,resSeq: 86,
Coordination distance[Å]: 2.641
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Mycobacterium smegmatis MC2 51
axial ligand #2: HIS
chainID: R,resSeq: 399,
Coordination distance[Å]: 2.798
molecule: same as ligand #1
List of other hemes in pdb:6adq
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
6adq-F-601 |
sad. +0.04 ruf. -0.34 dom. +0.95 bre. +0.22 |
HIS | chainID: F, resSeq: 397, molecule: Cytochrome c oxidase subunit 1 |
oxidoreductase oligomeric count: 24 pocket vol.: 688.0 Å3 d(Fe-oop): 0.458 Å |
| Not assigned. | ||||
6adq-F-602 |
sad. -0.12 ruf. +2.86 dom. +0.77 bre. +0.81 |
HIS | chainID: F, resSeq: 86, molecule: Cytochrome c oxidase subunit 1 |
oxidoreductase oligomeric count: 24 pocket vol.: 646.0 Å3 d(Fe-oop): 0.429 Å |
| HIS | chainID: F, resSeq: 399, molecule: Cytochrome c oxidase subunit 1 |
|||
6adq-B-601 |
sad. -1.10 ruf. -1.48 dom. -0.23 bre. +0.35 |
HIS | chainID: B, resSeq: 123, molecule: Ubiquinol-cytochrome c reductase cytochrome b subunit |
translocase oligomeric count: 24 pocket vol.: 351.0 Å3 d(Fe-oop): 0.244 Å |
| HIS | chainID: B, resSeq: 226, molecule: Ubiquinol-cytochrome c reductase cytochrome b subunit |
|||
6adq-B-602 |
sad. -0.56 ruf. +0.06 dom. -0.05 bre. +0.06 |
HIS | chainID: B, resSeq: 109, molecule: Ubiquinol-cytochrome c reductase cytochrome b subunit |
translocase oligomeric count: 24 pocket vol.: 366.0 Å3 d(Fe-oop): 0.118 Å |
| HIS | chainID: B, resSeq: 211, molecule: Ubiquinol-cytochrome c reductase cytochrome b subunit |
|||
6adq-C-301 |
sad. -0.17 ruf. -0.90 dom. +0.68 bre. +0.08 |
HIS | chainID: C, resSeq: 91, molecule: Cytochrome bc1 complex cytochrome c subunit |
oxidoreductase oligomeric count: 24 pocket vol.: 436.0 Å3 d(Fe-oop): 0.317 Å |
| Not assigned. | ||||
6adq-C-302 |
sad. +0.77 ruf. -1.23 dom. +0.24 bre. +0.11 |
HIS | chainID: C, resSeq: 192, molecule: Cytochrome bc1 complex cytochrome c subunit |
oxidoreductase oligomeric count: 24 pocket vol.: 386.0 Å3 d(Fe-oop): 0.263 Å |
| MET | chainID: C, resSeq: 229, molecule: Cytochrome bc1 complex cytochrome c subunit |
|||
6adq-R-601 |
sad. +0.04 ruf. -0.33 dom. +0.95 bre. +0.22 |
HIS | chainID: R, resSeq: 397, molecule: Cytochrome c oxidase subunit 1 |
oxidoreductase oligomeric count: 24 pocket vol.: 710.0 Å3 d(Fe-oop): 0.459 Å |
| Not assigned. | ||||
6adq-N-602 |
sad. -1.09 ruf. -1.49 dom. -0.23 bre. +0.36 |
HIS | chainID: N, resSeq: 123, molecule: Ubiquinol-cytochrome c reductase cytochrome b subunit |
translocase oligomeric count: 24 pocket vol.: 352.0 Å3 d(Fe-oop): 0.247 Å |
| HIS | chainID: N, resSeq: 226, molecule: Ubiquinol-cytochrome c reductase cytochrome b subunit |
|||
6adq-N-603 |
sad. -0.56 ruf. +0.06 dom. -0.04 bre. +0.05 |
HIS | chainID: N, resSeq: 109, molecule: Ubiquinol-cytochrome c reductase cytochrome b subunit |
translocase oligomeric count: 24 pocket vol.: 357.0 Å3 d(Fe-oop): 0.119 Å |
| HIS | chainID: N, resSeq: 211, molecule: Ubiquinol-cytochrome c reductase cytochrome b subunit |
|||
6adq-O-301 |
sad. -0.16 ruf. -0.90 dom. +0.68 bre. +0.08 |
HIS | chainID: O, resSeq: 91, molecule: Cytochrome bc1 complex cytochrome c subunit |
oxidoreductase oligomeric count: 24 pocket vol.: 439.0 Å3 d(Fe-oop): 0.316 Å |
| Not assigned. | ||||
6adq-O-302 |
sad. +0.77 ruf. -1.23 dom. +0.24 bre. +0.11 |
HIS | chainID: O, resSeq: 192, molecule: Cytochrome bc1 complex cytochrome c subunit |
oxidoreductase oligomeric count: 24 pocket vol.: 370.0 Å3 d(Fe-oop): 0.263 Å |
| MET | chainID: O, resSeq: 229, molecule: Cytochrome bc1 complex cytochrome c subunit |
|||