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PyDISH No: 12026

PDB: 5ze8,
chainID: A, resSeq: 502
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.6 Å

axial ligand #1: HIS

chainID: A,
resSeq: 103,
Coordination distance[Å]: 2.134
molecule: cytochrome c552
Organism: Thermochromatium tepidum

List of other hemes in pdb:5ze8

ID of heme Distortion Axial ligands on heme Function & structure
5ze8-A-501
 sad. -0.10
ruf. -0.04
dom. -0.19
bre. -0.07
 HIS chainID: A,
resSeq: 49,
molecule: cytochrome c552		 electron transporter
oligomeric count: 1
pocket vol.: 453.0 Å3
d(Fe-oop): 0.026 Å
HIS chainID: A, resSeq: 195,
molecule: cytochrome c552
5ze8-A-503
 sad. -0.20
ruf. -0.86
dom. +0.06
bre. -0.02
 HIS chainID: A,
resSeq: 131,
molecule: cytochrome c552		 electron transporter
oligomeric count: 1
pocket vol.: 448.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: A, resSeq: 270,
molecule: cytochrome c552
5ze8-A-504
 sad. -0.18
ruf. -0.58
dom. -0.14
bre. -0.05
 HIS chainID: A,
resSeq: 61,
molecule: cytochrome c552		 electron transporter
oligomeric count: 1
pocket vol.: 431.0 Å3
d(Fe-oop): 0.034 Å
HIS chainID: A, resSeq: 229,
molecule: cytochrome c552
5ze8-A-505
 sad. -0.12
ruf. -0.52
dom. -0.28
bre. -0.03
 HIS chainID: A,
resSeq: 260,
molecule: cytochrome c552		 electron transporter
oligomeric count: 1
pocket vol.: 406.0 Å3
d(Fe-oop): 0.041 Å
HIS chainID: A, resSeq: 310,
molecule: cytochrome c552