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PyDISH No: 12013

PDB: 5zco,
chainID: A, resSeq: 601
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.9 Å

axial ligand #1: HIS

chainID: A,
resSeq: 61,
Coordination distance[Å]: 1.967
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Bos taurus

axial ligand #2: HIS

chainID: A,
resSeq: 378,
Coordination distance[Å]: 2.003
molecule: same as ligand #1

List of other hemes in pdb:5zco

ID of heme Distortion Axial ligands on heme Function & structure
5zco-A-602
sad. -0.39
ruf. -0.11
dom. +0.46
bre. -0.15
HIS chainID: A,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 714.0 Å3
d(Fe-oop): 0.048 Å
AZI chainID: A, resSeq: 607,
molecule: AZIDE ION
5zco-N-602
sad. -0.60
ruf. +0.00
dom. +0.23
bre. +0.01
HIS chainID: N,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 539.0 Å3
d(Fe-oop): 0.017 Å
HIS chainID: N, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
5zco-N-603
sad. -0.37
ruf. -0.05
dom. +0.44
bre. -0.12
HIS chainID: N,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 710.0 Å3
d(Fe-oop): 0.042 Å
AZI chainID: N, resSeq: 608,
molecule: AZIDE ION