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PyDISH No: 12000

PDB: 5z85,
chainID: A, resSeq: 601
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.85 Å

axial ligand #1: HIS

chainID: A,
resSeq: 61,
Coordination distance[Å]: 1.96
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Bos taurus

axial ligand #2: HIS

chainID: A,
resSeq: 378,
Coordination distance[Å]: 1.984
molecule: same as ligand #1

List of other hemes in pdb:5z85

ID of heme Distortion Axial ligands on heme Function & structure
5z85-A-602
sad. -0.32
ruf. -0.07
dom. +0.37
bre. -0.18
HIS chainID: A,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 716.0 Å3
d(Fe-oop): 0.037 Å
AZI chainID: A, resSeq: 607,
molecule: AZIDE ION
5z85-N-601
sad. -0.59
ruf. +0.12
dom. +0.18
bre. +0.02
HIS chainID: N,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 540.0 Å3
d(Fe-oop): 0.026 Å
HIS chainID: N, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
5z85-N-602
sad. -0.27
ruf. -0.05
dom. +0.41
bre. -0.19
HIS chainID: N,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 706.0 Å3
d(Fe-oop): 0.043 Å
AZI chainID: N, resSeq: 607,
molecule: AZIDE ION