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PyDISH No: 11985

PDB: 5yqh,
chainID: B, resSeq: 501
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.3 Å

axial ligand #1: CYS

chainID: B,
resSeq: 358,
Coordination distance[Å]: 2.34
molecule: Cytochrome P450
Organism: Rhodopseudomonas palustris (strain HaA2)

axial ligand #2: HOH

chainID: B,
resSeq: 684,
Coordination distance[Å]: 2.341
molecule: water

List of other hemes in pdb:5yqh

ID of heme Distortion Axial ligands on heme Function & structure
5yqh-A-501
sad. -0.40
ruf. -0.84
dom. +0.04
bre. -0.15
CYS chainID: A,
resSeq: 358,
molecule: Cytochrome P450
oxidoreductase
oligomeric count: 1
pocket vol.: 387.0 Å3
d(Fe-oop): 0.120 Å
Not assigned.
5yqh-C-501
sad. -0.49
ruf. -0.82
dom. +0.13
bre. -0.15
CYS chainID: C,
resSeq: 358,
molecule: Cytochrome P450
oxidoreductase
oligomeric count: 1
pocket vol.: 378.0 Å3
d(Fe-oop): 0.125 Å
Not assigned.
5yqh-D-501
sad. -0.42
ruf. -0.73
dom. -0.03
bre. -0.24
CYS chainID: D,
resSeq: 358,
molecule: Cytochrome P450
oxidoreductase
oligomeric count: 1
pocket vol.: 383.0 Å3
d(Fe-oop): 0.288 Å
HOH chainID: D, resSeq: 606,
molecule: water