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PyDISH No: 11980

PDB: 5yq7,
chainID: C, resSeq: 502
heme type: B

distortion

Protein data

function: electron transporter
experiment: ELECTRON MICROSCOPY
resolution: 4.1 Å

axial ligand #1: MET

chainID: C,
resSeq: 145,
Coordination distance[Å]: 2.055
molecule: Cytochrome subunit of photosynthetic reaction center
Organism: Roseiflexus castenholzii

axial ligand #2: HIS

chainID: C,
resSeq: 175,
Coordination distance[Å]: 2.027
molecule: same as ligand #1

List of other hemes in pdb:5yq7

ID of heme Distortion Axial ligands on heme Function & structure
5yq7-C-501
sad. +0.01
ruf. +0.11
dom. -0.09
bre. -0.07
MET chainID: C,
resSeq: 106,
molecule: Cytochrome subunit of photosynthetic reaction center
electron transporter
oligomeric count: 35
pocket vol.: 548.0 Å3
d(Fe-oop): 0.086 Å
HIS chainID: C, resSeq: 122,
molecule: Cytochrome subunit of photosynthetic reaction center
5yq7-C-503
sad. +0.19
ruf. -0.07
dom. -0.07
bre. -0.02
MET chainID: C,
resSeq: 229,
molecule: Cytochrome subunit of photosynthetic reaction center
electron transporter
oligomeric count: 35
pocket vol.: 539.0 Å3
d(Fe-oop): 0.020 Å
HIS chainID: C, resSeq: 244,
molecule: Cytochrome subunit of photosynthetic reaction center
5yq7-C-504
sad. -0.03
ruf. +0.04
dom. -0.07
bre. -0.06
MET chainID: C,
resSeq: 263,
molecule: Cytochrome subunit of photosynthetic reaction center
electron transporter
oligomeric count: 35
pocket vol.: 519.0 Å3
d(Fe-oop): 0.036 Å
HIS chainID: C, resSeq: 297,
molecule: Cytochrome subunit of photosynthetic reaction center