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PyDISH No: 11915

PDB: 5xth,
chainID: x, resSeq: 604
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: ELECTRON MICROSCOPY
resolution: 3.9 Å

axial ligand #1: HIS

chainID: x,
resSeq: 376,
Coordination distance[Å]: 2.076
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Bos taurus

List of other hemes in pdb:5xth

ID of heme	Distortion	Axial ligands on heme		Function & structure
5xth-x-603	`sad. -0.59 ruf. -0.27 dom. +0.29 bre. +0.04`	HIS	chainID: x, resSeq: 61, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 80 pocket vol.: 631.0 Å³ d(Fe-oop): 0.038 Å
5xth-x-603	`sad. -0.59 ruf. -0.27 dom. +0.29 bre. +0.04`	HIS	chainID: x, resSeq: 378, molecule: Cytochrome c oxidase subunit 1
5xth-AH-402	`sad. -0.25 ruf. -1.28 dom. +0.60 bre. +0.08`	HIS	chainID: AH, resSeq: 125, molecule: Cytochrome c1, heme protein, mitochondrial	translocase oligomeric count: 80 pocket vol.: 522.0 Å³ d(Fe-oop): 0.086 Å
5xth-AH-402	`sad. -0.25 ruf. -1.28 dom. +0.60 bre. +0.08`	Not assigned.
5xth-AJ-401	`sad. -0.06 ruf. +0.10 dom. +0.12 bre. -0.21`	HIS	chainID: AJ, resSeq: 83, molecule: Cytochrome b	oxidoreductase oligomeric count: 80 pocket vol.: 451.0 Å³ d(Fe-oop): 0.013 Å
5xth-AJ-401	`sad. -0.06 ruf. +0.10 dom. +0.12 bre. -0.21`	HIS	chainID: AJ, resSeq: 182, molecule: Cytochrome b
5xth-AJ-402	`sad. -0.67 ruf. -0.54 dom. +0.26 bre. -0.16`	HIS	chainID: AJ, resSeq: 97, molecule: Cytochrome b	oxidoreductase oligomeric count: 80 pocket vol.: 435.0 Å³ d(Fe-oop): 0.094 Å
5xth-AJ-402	`sad. -0.67 ruf. -0.54 dom. +0.26 bre. -0.16`	HIS	chainID: AJ, resSeq: 196, molecule: Cytochrome b
5xth-AU-402	`sad. -0.14 ruf. -1.12 dom. +0.52 bre. -0.00`	HIS	chainID: AU, resSeq: 125, molecule: Cytochrome c1, heme protein, mitochondrial	translocase oligomeric count: 80 pocket vol.: 501.0 Å³ d(Fe-oop): 0.138 Å
5xth-AU-402	`sad. -0.14 ruf. -1.12 dom. +0.52 bre. -0.00`	MET	chainID: AU, resSeq: 244, molecule: Cytochrome c1, heme protein, mitochondrial
5xth-AV-401	`sad. -0.17 ruf. +0.19 dom. -0.15 bre. -0.19`	HIS	chainID: AV, resSeq: 83, molecule: Cytochrome b	oxidoreductase oligomeric count: 80 pocket vol.: 455.0 Å³ d(Fe-oop): 0.091 Å
5xth-AV-401	`sad. -0.17 ruf. +0.19 dom. -0.15 bre. -0.19`	HIS	chainID: AV, resSeq: 182, molecule: Cytochrome b
5xth-AV-402	`sad. -0.44 ruf. -0.80 dom. +0.25 bre. -0.14`	HIS	chainID: AV, resSeq: 97, molecule: Cytochrome b	oxidoreductase oligomeric count: 80 pocket vol.: 463.0 Å³ d(Fe-oop): 0.087 Å
5xth-AV-402	`sad. -0.44 ruf. -0.80 dom. +0.25 bre. -0.14`	HIS	chainID: AV, resSeq: 196, molecule: Cytochrome b