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PyDISH No: 11895

PDB: 5xmj,
chainID: C, resSeq: 301
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 3.6 Å

axial ligand #1: HIS

chainID: C,
resSeq: 38,
Coordination distance[Å]: 2.028
molecule: fumarate reductase respiratory complex
Organism: Desulfovibrio gigas

axial ligand #2: HIS

chainID: C,
resSeq: 129,
Coordination distance[Å]: 2.57
molecule: same as ligand #1

List of other hemes in pdb:5xmj

ID of heme Distortion Axial ligands on heme Function & structure
5xmj-C-302
sad. -1.37
ruf. +0.99
dom. +0.25
bre. +0.08
HIS chainID: C,
resSeq: 79,
molecule: fumarate reductase respiratory complex
oxidoreductase
oligomeric count: 6
pocket vol.: 412.0 Å3
d(Fe-oop): 0.143 Å
HIS chainID: C, resSeq: 166,
molecule: fumarate reductase respiratory complex
5xmj-G-301
sad. +0.83
ruf. +0.06
dom. +1.31
bre. +0.25
HIS chainID: G,
resSeq: 38,
molecule: fumarate reductase respiratory complex
oxidoreductase
oligomeric count: 6
pocket vol.: 494.0 Å3
d(Fe-oop): 0.020 Å
HIS chainID: G, resSeq: 129,
molecule: fumarate reductase respiratory complex
5xmj-G-302
sad. -1.06
ruf. +0.21
dom. -0.06
bre. -0.03
HIS chainID: G,
resSeq: 79,
molecule: fumarate reductase respiratory complex
oxidoreductase
oligomeric count: 6
pocket vol.: 418.0 Å3
d(Fe-oop): 0.271 Å
HIS chainID: G, resSeq: 166,
molecule: fumarate reductase respiratory complex
5xmj-K-301
sad. +0.81
ruf. -0.07
dom. +0.25
bre. -0.20
HIS chainID: K,
resSeq: 38,
molecule: fumarate reductase respiratory complex
oxidoreductase
oligomeric count: 6
pocket vol.: 520.0 Å3
d(Fe-oop): 0.079 Å
HIS chainID: K, resSeq: 129,
molecule: fumarate reductase respiratory complex
5xmj-K-302
sad. -1.53
ruf. +0.76
dom. +0.12
bre. +0.26
HIS chainID: K,
resSeq: 79,
molecule: fumarate reductase respiratory complex
oxidoreductase
oligomeric count: 6
pocket vol.: 455.0 Å3
d(Fe-oop): 0.086 Å
HIS chainID: K, resSeq: 166,
molecule: fumarate reductase respiratory complex
5xmj-O-302
sad. +0.50
ruf. +0.01
dom. -0.09
bre. -0.04
HIS chainID: O,
resSeq: 38,
molecule: fumarate reductase respiratory complex
oxidoreductase
oligomeric count: 6
pocket vol.: 503.0 Å3
d(Fe-oop): 0.052 Å
HIS chainID: O, resSeq: 129,
molecule: fumarate reductase respiratory complex
5xmj-O-303
sad. -0.92
ruf. +0.46
dom. -0.26
bre. -0.11
HIS chainID: O,
resSeq: 79,
molecule: fumarate reductase respiratory complex
oxidoreductase
oligomeric count: 6
pocket vol.: 448.0 Å3
d(Fe-oop): 0.018 Å
HIS chainID: O, resSeq: 166,
molecule: fumarate reductase respiratory complex