Browser

PyDISH No: 11882

PDB: 5xdx,
chainID: N, resSeq: 601
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.99 Å

axial ligand #1: HIS

chainID: N,
resSeq: 61,
Coordination distance[Å]: 1.987
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Bos taurus

axial ligand #2: HIS

chainID: N,
resSeq: 378,
Coordination distance[Å]: 1.993
molecule: same as ligand #1

List of other hemes in pdb:5xdx

ID of heme Distortion Axial ligands on heme Function & structure
5xdx-A-601
sad. -0.48
ruf. +0.34
dom. +0.21
bre. -0.29
HIS chainID: A,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 571.0 Å3
d(Fe-oop): 0.019 Å
HIS chainID: A, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
5xdx-A-602
sad. -0.32
ruf. -0.03
dom. +0.53
bre. -0.26
HIS chainID: A,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 667.0 Å3
d(Fe-oop): 0.058 Å
Not assigned.
5xdx-N-602
sad. -0.27
ruf. -0.01
dom. +0.50
bre. -0.28
HIS chainID: N,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 668.0 Å3
d(Fe-oop): 0.063 Å
Not assigned.