Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 11879

PDB: 5xdq,
chainID: N, resSeq: 602
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.77 Å

axial ligand #1: HIS

chainID: N,
resSeq: 376,
Coordination distance[Å]: 2.183
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Bos taurus

axial ligand #2: PER

chainID: N,
resSeq: 608,
Coordination distance[Å]: 2.291
molecule: PEROXIDE ION

List of other hemes in pdb:5xdq

ID of heme	Distortion	Axial ligands on heme		Function & structure
5xdq-A-601	`sad. -0.43 ruf. -0.05 dom. +0.23 bre. -0.33`	HIS	chainID: A, resSeq: 61, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 13 pocket vol.: 554.0 Å³ d(Fe-oop): 0.024 Å
5xdq-A-601	`sad. -0.43 ruf. -0.05 dom. +0.23 bre. -0.33`	HIS	chainID: A, resSeq: 378, molecule: Cytochrome c oxidase subunit 1
5xdq-A-602	`sad. -0.27 ruf. -0.10 dom. +0.34 bre. -0.31`	HIS	chainID: A, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 13 pocket vol.: 675.0 Å³ d(Fe-oop): 0.040 Å
5xdq-A-602	`sad. -0.27 ruf. -0.10 dom. +0.34 bre. -0.31`	PER	chainID: A, resSeq: 607, molecule: PEROXIDE ION
5xdq-N-601	`sad. -0.28 ruf. -0.09 dom. +0.17 bre. -0.32`	HIS	chainID: N, resSeq: 61, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 13 pocket vol.: 573.0 Å³ d(Fe-oop): 0.022 Å
5xdq-N-601	`sad. -0.28 ruf. -0.09 dom. +0.17 bre. -0.32`	HIS	chainID: N, resSeq: 378, molecule: Cytochrome c oxidase subunit 1