Browser

clear
→ advanced search

PyDISH No: 11872

PDB: 5xdh,
chainID: A, resSeq: 101
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.32 Å
origomeric count: 1

axial ligand #1: HIS

chainID: A,
resSeq: 15,
Coordination distance[Å]: 2.026
molecule: Putative cytochrome c
Organism: Candidatus Jettenia caeni

axial ligand #2: DAH

chainID: A,
resSeq: 60,
Coordination distance[Å]: 1.96
molecule: same as ligand #1

List of other hemes in pdb:5xdh

ID of heme Distortion Axial ligands on heme Function & structure
5xdh-B-101
 sad. +0.21
ruf. -0.50
dom. -0.14
bre. -0.08
 HIS chainID: B,
resSeq: 15,
molecule: Putative cytochrome c		 electron transporter
oligomeric count: 1
pocket vol.: 338.0 Å3
d(Fe-oop): 0.010 Å
DAH chainID: B, resSeq: 60,
molecule: Putative cytochrome c
5xdh-C-101
 sad. +0.14
ruf. -0.59
dom. -0.07
bre. -0.06
 HIS chainID: C,
resSeq: 15,
molecule: Putative cytochrome c		 electron transporter
oligomeric count: 1
pocket vol.: 350.0 Å3
d(Fe-oop): 0.009 Å
DAH chainID: C, resSeq: 60,
molecule: Putative cytochrome c
5xdh-D-101
 sad. -0.01
ruf. -0.47
dom. -0.09
bre. -0.07
 HIS chainID: D,
resSeq: 15,
molecule: Putative cytochrome c		 electron transporter
oligomeric count: 1
pocket vol.: 354.0 Å3
d(Fe-oop): 0.015 Å
DAH chainID: D, resSeq: 60,
molecule: Putative cytochrome c