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PyDISH No: 11406

PDB: 5okd,
chainID: C, resSeq: 403
heme type: B

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.1 Å

axial ligand #1: HIS

chainID: C,
resSeq: 97,
Coordination distance[Å]: 2.335
molecule: Cytochrome b
Organism: Bos taurus

axial ligand #2: HIS

chainID: C,
resSeq: 196,
Coordination distance[Å]: 2.282
molecule: same as ligand #1

List of other hemes in pdb:5okd

ID of heme Distortion Axial ligands on heme Function & structure
5okd-C-402
 sad. -0.01
ruf. -0.17
dom. -0.00
bre. -0.09
 HIS chainID: C,
resSeq: 83,
molecule: Cytochrome b		 electron transporter
oligomeric count: 10
pocket vol.: 414.0 Å3
d(Fe-oop): 0.009 Å
HIS chainID: C, resSeq: 182,
molecule: Cytochrome b
5okd-D-501
 sad. -0.01
ruf. -0.37
dom. +0.09
bre. -0.64
 HIS chainID: D,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial		 translocase
oligomeric count: 10
pocket vol.: 469.0 Å3
d(Fe-oop): 0.001 Å
MET chainID: D, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial