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PyDISH No: 11405

PDB: 5okd,
chainID: C, resSeq: 402
heme type: B

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.1 Å

axial ligand #1: HIS

chainID: C,
resSeq: 83,
Coordination distance[Å]: 2.261
molecule: Cytochrome b
Organism: Bos taurus

axial ligand #2: HIS

chainID: C,
resSeq: 182,
Coordination distance[Å]: 2.273
molecule: same as ligand #1

List of other hemes in pdb:5okd

ID of heme Distortion Axial ligands on heme Function & structure
5okd-C-403
 sad. -0.34
ruf. -0.47
dom. +0.29
bre. -0.04
 HIS chainID: C,
resSeq: 97,
molecule: Cytochrome b		 electron transporter
oligomeric count: 10
pocket vol.: 405.0 Å3
d(Fe-oop): 0.016 Å
HIS chainID: C, resSeq: 196,
molecule: Cytochrome b
5okd-D-501
 sad. -0.01
ruf. -0.37
dom. +0.09
bre. -0.64
 HIS chainID: D,
resSeq: 41,
molecule: Cytochrome c1, heme protein, mitochondrial		 translocase
oligomeric count: 10
pocket vol.: 469.0 Å3
d(Fe-oop): 0.001 Å
MET chainID: D, resSeq: 160,
molecule: Cytochrome c1, heme protein, mitochondrial