Browser

PyDISH No: 11398

PDB: 5ohf,
chainID: H, resSeq: 200
heme type: B

distortion

Protein data

function: transferase
experiment: X-RAY DIFFRACTION
resolution: 1.8 Å

axial ligand #1: HIS

chainID: H,
resSeq: 99,
Coordination distance[Å]: 2.129
molecule: Globin-coupled histidine kinase
EC number: 2.7.13.3
Organism: Anaeromyxobacter sp. (strain Fw109-5)

axial ligand #2: CYN

chainID: H,
resSeq: 201,
Coordination distance[Å]: 2.159
molecule: CYANIDE ION

List of other hemes in pdb:5ohf

ID of heme Distortion Axial ligands on heme Function & structure
5ohf-A-200
sad. +0.14
ruf. -0.99
dom. -0.15
bre. -0.00
HIS chainID: A,
resSeq: 99,
molecule: Globin-coupled histidine kinase
transferase
oligomeric count: 2
pocket vol.: 560.0 Å3
d(Fe-oop): 0.012 Å
CYN chainID: A, resSeq: 201,
molecule: CYANIDE ION
5ohf-B-200
sad. +0.19
ruf. -0.85
dom. -0.12
bre. -0.02
HIS chainID: B,
resSeq: 99,
molecule: Globin-coupled histidine kinase
transferase
oligomeric count: 2
pocket vol.: 548.0 Å3
d(Fe-oop): 0.001 Å
CYN chainID: B, resSeq: 201,
molecule: CYANIDE ION
5ohf-C-200
sad. +0.16
ruf. -0.75
dom. -0.11
bre. -0.03
HIS chainID: C,
resSeq: 99,
molecule: Globin-coupled histidine kinase
transferase
oligomeric count: 2
pocket vol.: 586.0 Å3
d(Fe-oop): 0.003 Å
CYN chainID: C, resSeq: 201,
molecule: CYANIDE ION
5ohf-D-200
sad. +0.16
ruf. -0.87
dom. -0.12
bre. +0.03
HIS chainID: D,
resSeq: 99,
molecule: Globin-coupled histidine kinase
transferase
oligomeric count: 2
pocket vol.: 605.0 Å3
d(Fe-oop): 0.002 Å
CYN chainID: D, resSeq: 201,
molecule: CYANIDE ION
5ohf-E-201
sad. +0.28
ruf. -0.88
dom. -0.18
bre. +0.02
HIS chainID: E,
resSeq: 99,
molecule: Globin-coupled histidine kinase
transferase
oligomeric count: 2
pocket vol.: 563.0 Å3
d(Fe-oop): 0.002 Å
CYN chainID: E, resSeq: 202,
molecule: CYANIDE ION
5ohf-F-200
sad. +0.21
ruf. -0.92
dom. -0.18
bre. +0.03
HIS chainID: F,
resSeq: 99,
molecule: Globin-coupled histidine kinase
transferase
oligomeric count: 2
pocket vol.: 551.0 Å3
d(Fe-oop): 0.004 Å
CYN chainID: F, resSeq: 201,
molecule: CYANIDE ION
5ohf-G-200
sad. +0.13
ruf. -0.86
dom. -0.07
bre. +0.05
HIS chainID: G,
resSeq: 99,
molecule: Globin-coupled histidine kinase
transferase
oligomeric count: 2
pocket vol.: 335.0 Å3
d(Fe-oop): 0.062 Å
CYN chainID: G, resSeq: 201,
molecule: CYANIDE ION