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PyDISH No: 11331

PDB: 5nj4,
chainID: C, resSeq: 402
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.4 Å

axial ligand #1: MET

chainID: C,
resSeq: 110,
Coordination distance[Å]: 2.312
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Blastochloris viridis

axial ligand #2: HIS

chainID: C,
resSeq: 136,
Coordination distance[Å]: 2.015
molecule: same as ligand #1

List of other hemes in pdb:5nj4

ID of heme Distortion Axial ligands on heme Function & structure
5nj4-C-401
sad. +0.46
ruf. -0.44
dom. +0.04
bre. -0.21
MET chainID: C,
resSeq: 74,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 367.0 Å3
d(Fe-oop): 0.028 Å
HIS chainID: C, resSeq: 91,
molecule: Photosynthetic reaction center cytochrome c subunit
5nj4-C-403
sad. +0.32
ruf. -0.77
dom. +0.07
bre. -0.15
MET chainID: C,
resSeq: 233,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 319.0 Å3
d(Fe-oop): 0.041 Å
HIS chainID: C, resSeq: 248,
molecule: Photosynthetic reaction center cytochrome c subunit
5nj4-C-404
sad. +0.17
ruf. -0.52
dom. +0.08
bre. -0.24
HIS chainID: C,
resSeq: 124,
molecule: Photosynthetic reaction center cytochrome c subunit
electron transporter
oligomeric count: 4
pocket vol.: 355.0 Å3
d(Fe-oop): 0.055 Å
HIS chainID: C, resSeq: 309,
molecule: Photosynthetic reaction center cytochrome c subunit