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Protein data
function: oxygen carrierexperiment: ELECTRON MICROSCOPY
resolution: 3.8 Å
axial ligand #1: HIS
chainID: K,resSeq: 102,
Coordination distance[Å]: 2.696
molecule: Extracellular globin-3
Organism: Lumbricus terrestris
List of other hemes in pdb:5m3l
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
5m3l-A-201 |
sad. -0.07 ruf. +0.87 dom. -0.06 bre. +0.04 |
HIS | chainID: A, resSeq: 101, molecule: Extracellular globin-4 |
oxygen carrier oligomeric count: 15 pocket vol.: 691.0 Å3 d(Fe-oop): 0.000 Å |
| Not assigned. | ||||
5m3l-B-201 |
sad. +0.18 ruf. +0.40 dom. -0.27 bre. +0.03 |
HIS | chainID: B, resSeq: 96, molecule: Extracellular globin-2 |
oxygen carrier oligomeric count: 15 pocket vol.: 680.0 Å3 d(Fe-oop): 0.023 Å |
| Not assigned. | ||||
5m3l-C-201 |
sad. -0.18 ruf. +0.06 dom. +0.24 bre. +0.06 |
HIS | chainID: C, resSeq: 102, molecule: Extracellular globin-3 |
oxygen carrier oligomeric count: 15 pocket vol.: 592.0 Å3 d(Fe-oop): 0.006 Å |
| Not assigned. | ||||
5m3l-D-201 |
sad. +0.06 ruf. -0.03 dom. -0.40 bre. -0.02 |
HIS | chainID: D, resSeq: 101, molecule: Hemoglobin chain d1 |
oxygen carrier oligomeric count: 15 pocket vol.: 684.0 Å3 d(Fe-oop): 0.017 Å |
| Not assigned. | ||||
5m3l-E-201 |
sad. -0.06 ruf. +1.00 dom. +0.08 bre. +0.02 |
HIS | chainID: E, resSeq: 101, molecule: Extracellular globin-4 |
oxygen carrier oligomeric count: 15 pocket vol.: 659.0 Å3 d(Fe-oop): 0.020 Å |
| Not assigned. | ||||
5m3l-F-201 |
sad. +0.13 ruf. +0.23 dom. -0.27 bre. +0.04 |
HIS | chainID: F, resSeq: 96, molecule: Extracellular globin-2 |
oxygen carrier oligomeric count: 15 pocket vol.: 709.0 Å3 d(Fe-oop): 0.000 Å |
| Not assigned. | ||||
5m3l-G-201 |
sad. -0.29 ruf. +0.28 dom. +0.21 bre. +0.00 |
HIS | chainID: G, resSeq: 102, molecule: Extracellular globin-3 |
oxygen carrier oligomeric count: 15 pocket vol.: 601.0 Å3 d(Fe-oop): 0.002 Å |
| Not assigned. | ||||
5m3l-H-201 |
sad. +0.14 ruf. -0.07 dom. -0.29 bre. -0.04 |
HIS | chainID: H, resSeq: 101, molecule: Hemoglobin chain d1 |
oxygen carrier oligomeric count: 15 pocket vol.: 693.0 Å3 d(Fe-oop): 0.006 Å |
| Not assigned. | ||||
5m3l-I-201 |
sad. -0.05 ruf. +1.02 dom. +0.03 bre. +0.03 |
HIS | chainID: I, resSeq: 101, molecule: Extracellular globin-4 |
oxygen carrier oligomeric count: 15 pocket vol.: 646.0 Å3 d(Fe-oop): 0.019 Å |
| Not assigned. | ||||
5m3l-J-201 |
sad. +0.06 ruf. +0.29 dom. -0.18 bre. -0.03 |
HIS | chainID: J, resSeq: 96, molecule: Extracellular globin-2 |
oxygen carrier oligomeric count: 15 pocket vol.: 677.0 Å3 d(Fe-oop): 0.018 Å |
| Not assigned. | ||||
5m3l-L-201 |
sad. +0.16 ruf. +0.08 dom. -0.31 bre. +0.01 |
HIS | chainID: L, resSeq: 101, molecule: Hemoglobin chain d1 |
oxygen carrier oligomeric count: 15 pocket vol.: 718.0 Å3 d(Fe-oop): 0.008 Å |
| Not assigned. | ||||