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PyDISH No: 11230

PDB: 5luf,
chainID: x, resSeq: 603
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: ELECTRON MICROSCOPY
resolution: 9.1 Å
origomeric count: 62

axial ligand #1: HIS

chainID: x,
resSeq: 61,
Coordination distance[Å]: 1.835
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Bos taurus

axial ligand #2: HIS

chainID: x,
resSeq: 378,
Coordination distance[Å]: 1.9
molecule: same as ligand #1

List of other hemes in pdb:5luf

ID of heme	Distortion	Axial ligands on heme		Function & structure
5luf-b-401	`sad. -0.16 ruf. +0.07 dom. -0.22 bre. -0.07`	HIS	chainID: b, resSeq: 83, molecule: Cytochrome b	electron transporter oligomeric count: 62 pocket vol.: 397.0 Å³ d(Fe-oop): 0.280 Å
5luf-b-401	`sad. -0.16 ruf. +0.07 dom. -0.22 bre. -0.07`	HIS	chainID: b, resSeq: 182, molecule: Cytochrome b
5luf-b-402	`sad. -0.54 ruf. -0.63 dom. +0.02 bre. -0.07`	HIS	chainID: b, resSeq: 97, molecule: Cytochrome b	electron transporter oligomeric count: 62 pocket vol.: 388.0 Å³ d(Fe-oop): 0.055 Å
5luf-b-402	`sad. -0.54 ruf. -0.63 dom. +0.02 bre. -0.07`	HIS	chainID: b, resSeq: 196, molecule: Cytochrome b
5luf-d-301	`sad. -0.33 ruf. -0.68 dom. +0.16 bre. +0.00`	HIS	chainID: d, resSeq: 41, molecule: Cytochrome c1, heme protein, mitochondrial	translocase oligomeric count: 62 pocket vol.: 446.0 Å³ d(Fe-oop): 0.027 Å
5luf-d-301	`sad. -0.33 ruf. -0.68 dom. +0.16 bre. +0.00`	MET	chainID: d, resSeq: 160, molecule: Cytochrome c1, heme protein, mitochondrial
5luf-o-401	`sad. -0.22 ruf. -0.08 dom. -0.23 bre. -0.17`	HIS	chainID: o, resSeq: 83, molecule: Cytochrome b	electron transporter oligomeric count: 62 pocket vol.: 407.0 Å³ d(Fe-oop): 0.148 Å
5luf-o-401	`sad. -0.22 ruf. -0.08 dom. -0.23 bre. -0.17`	HIS	chainID: o, resSeq: 182, molecule: Cytochrome b
5luf-o-402	`sad. -0.60 ruf. -0.73 dom. +0.24 bre. -0.06`	HIS	chainID: o, resSeq: 97, molecule: Cytochrome b	electron transporter oligomeric count: 62 pocket vol.: 388.0 Å³ d(Fe-oop): 0.206 Å
5luf-o-402	`sad. -0.60 ruf. -0.73 dom. +0.24 bre. -0.06`	HIS	chainID: o, resSeq: 196, molecule: Cytochrome b
5luf-p-301	`sad. -0.39 ruf. -0.66 dom. +0.03 bre. +0.02`	HIS	chainID: p, resSeq: 41, molecule: Cytochrome c1, heme protein, mitochondrial	translocase oligomeric count: 62 pocket vol.: 451.0 Å³ d(Fe-oop): 0.021 Å
5luf-p-301	`sad. -0.39 ruf. -0.66 dom. +0.03 bre. +0.02`	MET	chainID: p, resSeq: 160, molecule: Cytochrome c1, heme protein, mitochondrial
5luf-x-604	`sad. -0.27 ruf. -0.21 dom. +0.31 bre. -0.11`	HIS	chainID: x, resSeq: 376, molecule: Cytochrome c oxidase subunit 1	oxidoreductase oligomeric count: 62 pocket vol.: 755.0 Å³ d(Fe-oop): 0.025 Å
5luf-x-604	`sad. -0.27 ruf. -0.21 dom. +0.31 bre. -0.11`	Not assigned.