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Protein data
function: electron transporterexperiment: X-RAY DIFFRACTION
resolution: 2.996 Å
origomeric count: 6
axial ligand #1: HIS
chainID: F,resSeq: 40,
Coordination distance[Å]: 1.971
molecule: Cytochrome c1
Organism: Rhodobacter sphaeroides
axial ligand #2: MET
chainID: F,resSeq: 185,
Coordination distance[Å]: 2.221
molecule: same as ligand #1
List of other hemes in pdb:5kli
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
5kli-A-1001 |
sad. +0.09 ruf. -0.12 dom. +0.04 bre. -0.13 |
HIS | chainID: A, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 422.0 Å3 d(Fe-oop): 0.006 Å |
| HIS | chainID: A, resSeq: 198, molecule: Cytochrome b |
|||
5kli-A-1002 |
sad. -0.53 ruf. -0.71 dom. +0.16 bre. -0.07 |
HIS | chainID: A, resSeq: 111, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 411.0 Å3 d(Fe-oop): 0.004 Å |
| HIS | chainID: A, resSeq: 212, molecule: Cytochrome b |
|||
5kli-B-1001 |
sad. -0.16 ruf. -0.15 dom. -0.10 bre. -0.15 |
HIS | chainID: B, resSeq: 40, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 421.0 Å3 d(Fe-oop): 0.136 Å |
| MET | chainID: B, resSeq: 185, molecule: Cytochrome c1 |
|||
5kli-E-1001 |
sad. -0.01 ruf. -0.29 dom. -0.16 bre. -0.07 |
HIS | chainID: E, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 412.0 Å3 d(Fe-oop): 0.002 Å |
| HIS | chainID: E, resSeq: 198, molecule: Cytochrome b |
|||
5kli-E-1002 |
sad. -0.45 ruf. -0.58 dom. +0.33 bre. -0.17 |
HIS | chainID: E, resSeq: 111, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 419.0 Å3 d(Fe-oop): 0.004 Å |
| HIS | chainID: E, resSeq: 212, molecule: Cytochrome b |
|||
5kli-K-1001 |
sad. +0.12 ruf. -0.27 dom. -0.10 bre. -0.14 |
HIS | chainID: K, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 400.0 Å3 d(Fe-oop): 0.001 Å |
| HIS | chainID: K, resSeq: 198, molecule: Cytochrome b |
|||
5kli-K-1002 |
sad. -0.49 ruf. -0.36 dom. +0.26 bre. -0.17 |
HIS | chainID: K, resSeq: 111, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 397.0 Å3 d(Fe-oop): 0.006 Å |
| HIS | chainID: K, resSeq: 212, molecule: Cytochrome b |
|||
5kli-L-1001 |
sad. +0.11 ruf. -0.06 dom. -0.01 bre. -0.24 |
HIS | chainID: L, resSeq: 40, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 405.0 Å3 d(Fe-oop): 0.041 Å |
| MET | chainID: L, resSeq: 185, molecule: Cytochrome c1 |
|||
5kli-O-1001 |
sad. +0.10 ruf. -0.12 dom. +0.08 bre. -0.14 |
HIS | chainID: O, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 405.0 Å3 d(Fe-oop): 0.005 Å |
| HIS | chainID: O, resSeq: 198, molecule: Cytochrome b |
|||
5kli-O-1002 |
sad. -0.40 ruf. -0.75 dom. +0.13 bre. -0.16 |
HIS | chainID: O, resSeq: 111, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 424.0 Å3 d(Fe-oop): 0.003 Å |
| HIS | chainID: O, resSeq: 212, molecule: Cytochrome b |
|||
5kli-P-1001 |
sad. -0.03 ruf. +0.06 dom. -0.13 bre. -0.24 |
HIS | chainID: P, resSeq: 40, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 445.0 Å3 d(Fe-oop): 0.049 Å |
| MET | chainID: P, resSeq: 185, molecule: Cytochrome c1 |
|||