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Protein data
function: electron transporterexperiment: X-RAY DIFFRACTION
resolution: 2.97 Å
axial ligand #1: HIS
chainID: A,resSeq: 97,
Coordination distance[Å]: 1.985
molecule: Cytochrome b
Organism: Rhodobacter sphaeroides
axial ligand #2: HIS
chainID: A,resSeq: 198,
Coordination distance[Å]: 2.03
molecule: same as ligand #1
List of other hemes in pdb:5kkz
ID of heme | Distortion | Axial ligands on heme | Function & structure | |
---|---|---|---|---|
5kkz-A-1002 |
sad. -0.59 ruf. -0.52 dom. +0.26 bre. -0.02 |
HIS | chainID: A, resSeq: 111, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 410.0 Å3 d(Fe-oop): 0.002 Å |
HIS | chainID: A, resSeq: 212, molecule: Cytochrome b |
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5kkz-B-1001 |
sad. -0.08 ruf. -0.05 dom. -0.00 bre. -0.13 |
HIS | chainID: B, resSeq: 40, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 421.0 Å3 d(Fe-oop): 0.053 Å |
MET | chainID: B, resSeq: 185, molecule: Cytochrome c1 |
|||
5kkz-E-1001 |
sad. +0.04 ruf. -0.10 dom. -0.11 bre. -0.03 |
HIS | chainID: E, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 419.0 Å3 d(Fe-oop): 0.004 Å |
HIS | chainID: E, resSeq: 198, molecule: Cytochrome b |
|||
5kkz-E-1002 |
sad. -0.46 ruf. -0.68 dom. +0.23 bre. -0.04 |
HIS | chainID: E, resSeq: 111, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 409.0 Å3 d(Fe-oop): 0.007 Å |
HIS | chainID: E, resSeq: 212, molecule: Cytochrome b |
|||
5kkz-F-1001 |
sad. +0.04 ruf. -0.02 dom. +0.03 bre. -0.17 |
HIS | chainID: F, resSeq: 40, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 420.0 Å3 d(Fe-oop): 0.036 Å |
MET | chainID: F, resSeq: 185, molecule: Cytochrome c1 |
|||
5kkz-K-1001 |
sad. +0.14 ruf. -0.21 dom. -0.13 bre. -0.00 |
HIS | chainID: K, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 423.0 Å3 d(Fe-oop): 0.002 Å |
HIS | chainID: K, resSeq: 198, molecule: Cytochrome b |
|||
5kkz-K-1002 |
sad. -0.52 ruf. -0.71 dom. +0.19 bre. -0.18 |
HIS | chainID: K, resSeq: 111, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 405.0 Å3 d(Fe-oop): 0.010 Å |
HIS | chainID: K, resSeq: 212, molecule: Cytochrome b |
|||
5kkz-L-1001 |
sad. +0.11 ruf. -0.14 dom. -0.05 bre. -0.10 |
HIS | chainID: L, resSeq: 40, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 407.0 Å3 d(Fe-oop): 0.057 Å |
MET | chainID: L, resSeq: 185, molecule: Cytochrome c1 |
|||
5kkz-O-1001 |
sad. +0.23 ruf. -0.27 dom. -0.03 bre. -0.02 |
HIS | chainID: O, resSeq: 97, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 418.0 Å3 d(Fe-oop): 0.001 Å |
HIS | chainID: O, resSeq: 198, molecule: Cytochrome b |
|||
5kkz-O-1002 |
sad. -0.43 ruf. -0.69 dom. +0.20 bre. -0.15 |
HIS | chainID: O, resSeq: 111, molecule: Cytochrome b |
electron transporter oligomeric count: 6 pocket vol.: 402.0 Å3 d(Fe-oop): 0.002 Å |
HIS | chainID: O, resSeq: 212, molecule: Cytochrome b |
|||
5kkz-P-1001 |
sad. +0.05 ruf. +0.12 dom. +0.04 bre. -0.20 |
HIS | chainID: P, resSeq: 40, molecule: Cytochrome c1 |
electron transporter oligomeric count: 6 pocket vol.: 433.0 Å3 d(Fe-oop): 0.068 Å |
MET | chainID: P, resSeq: 185, molecule: Cytochrome c1 |