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Protein data
function: electron transporterexperiment: X-RAY DIFFRACTION
resolution: 1.6 Å
axial ligand #1: HIS
chainID: F,resSeq: 125,
Coordination distance[Å]: 2.165
molecule: Cytochrome c'
Organism: Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D)
List of other hemes in pdb:5gyr
| ID of heme | Distortion | Axial ligands on heme | Function & structure | |
|---|---|---|---|---|
5gyr-A-201 |
sad. +0.04 ruf. -0.41 dom. +0.21 bre. -0.01 |
HIS | chainID: A, resSeq: 125, molecule: Cytochrome c' |
electron transporter oligomeric count: 4 pocket vol.: 455.0 Å3 d(Fe-oop): 0.026 Å |
| Not assigned. | ||||
5gyr-B-201 |
sad. -0.03 ruf. -0.45 dom. +0.27 bre. -0.08 |
HIS | chainID: B, resSeq: 125, molecule: Cytochrome c' |
electron transporter oligomeric count: 4 pocket vol.: 437.0 Å3 d(Fe-oop): 0.034 Å |
| Not assigned. | ||||
5gyr-E-201 |
sad. -0.01 ruf. -0.45 dom. +0.21 bre. -0.08 |
HIS | chainID: E, resSeq: 125, molecule: Cytochrome c' |
electron transporter oligomeric count: 4 pocket vol.: 429.0 Å3 d(Fe-oop): 0.024 Å |
| Not assigned. | ||||
5gyr-I-201 |
sad. -0.03 ruf. -0.30 dom. +0.24 bre. -0.08 |
HIS | chainID: I, resSeq: 125, molecule: Cytochrome c' |
electron transporter oligomeric count: 4 pocket vol.: 435.0 Å3 d(Fe-oop): 0.020 Å |
| Not assigned. | ||||
5gyr-J-201 |
sad. +0.03 ruf. -0.39 dom. +0.18 bre. -0.09 |
HIS | chainID: J, resSeq: 125, molecule: Cytochrome c' |
electron transporter oligomeric count: 4 pocket vol.: 447.0 Å3 d(Fe-oop): 0.027 Å |
| Not assigned. | ||||
5gyr-M-201 |
sad. +0.00 ruf. -0.31 dom. +0.21 bre. -0.11 |
HIS | chainID: M, resSeq: 125, molecule: Cytochrome c' |
electron transporter oligomeric count: 4 pocket vol.: 447.0 Å3 d(Fe-oop): 0.018 Å |
| Not assigned. | ||||
5gyr-N-201 |
sad. +0.05 ruf. -0.36 dom. +0.19 bre. -0.09 |
HIS | chainID: N, resSeq: 125, molecule: Cytochrome c' |
electron transporter oligomeric count: 4 pocket vol.: 445.0 Å3 d(Fe-oop): 0.031 Å |
| Not assigned. | ||||