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PyDISH No: 10852

PDB: 5gth,
chainID: E, resSeq: 103
heme type: B

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.5 Å

axial ligand #1: HIS

chainID: E,
resSeq: 23,
Coordination distance[Å]: 2.098
molecule: Cytochrome b559 subunit alpha
Organism: Thermosynechococcus vulcanus

axial ligand #2: HIS

chainID: F,
resSeq: 24,
Coordination distance[Å]: 2.09
molecule: Cytochrome b559 subunit beta
Organism: Thermosynechococcus vulcanus

List of other hemes in pdb:5gth

ID of heme Distortion Axial ligands on heme Function & structure
5gth-V-202
sad. +0.22
ruf. -0.52
dom. +0.02
bre. -0.07
HIS chainID: V,
resSeq: 41,
molecule: Cytochrome c-550
electron transporter
oligomeric count: 20
pocket vol.: 417.0 Å3
d(Fe-oop): 0.046 Å
HIS chainID: V, resSeq: 92,
molecule: Cytochrome c-550
5gth-e-103
sad. +0.52
ruf. -0.29
dom. +0.17
bre. -0.05
HIS chainID: e,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 19
pocket vol.: 485.0 Å3
d(Fe-oop): 0.089 Å
HIS chainID: f, resSeq: 24,
molecule: Cytochrome b559 subunit beta
5gth-v-201
sad. +0.23
ruf. -0.68
dom. -0.02
bre. -0.01
HIS chainID: v,
resSeq: 41,
molecule: Cytochrome c-550
electron transporter
oligomeric count: 19
pocket vol.: 439.0 Å3
d(Fe-oop): 0.068 Å
HIS chainID: v, resSeq: 92,
molecule: Cytochrome c-550