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PyDISH No: 10712

PDB: 5ek3,
chainID: B, resSeq: 501
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.209 Å
origomeric count: 1

axial ligand #1: HIS

chainID: B,
resSeq: 346,
Coordination distance[Å]: 2.176
molecule: Indoleamine 2,3-dioxygenase 1
EC number: 1.13.11.52
Organism: Homo sapiens

axial ligand #2: 5PK

chainID: B,
resSeq: 502,
Coordination distance[Å]: 2.254
molecule: (1~{R})-1-cyclohexyl-2-[(5~{S})-5~{H}-imidazo[1,5-b]isoindol-5-yl]ethanol

List of other hemes in pdb:5ek3

ID of heme Distortion Axial ligands on heme Function & structure
5ek3-A-501
sad. +0.48
ruf. +0.07
dom. -0.14
bre. -0.18
HIS chainID: A,
resSeq: 346,
molecule: Indoleamine 2,3-dioxygenase 1
oxidoreductase
oligomeric count: 1
pocket vol.: 489.0 Å3
d(Fe-oop): 0.058 Å
5PK chainID: A, resSeq: 502,
molecule: (1~{R})-1-cyclohexyl-2-[(5~{S})-5~{H}-imidazo[1,5-b]isoindol-5-yl]ethanol