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PyDISH No: 10682

PDB: 5e79,
chainID: v, resSeq: 201
heme type: B

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.5 Å

axial ligand #1: HIS

chainID: v,
resSeq: 41,
Coordination distance[Å]: 2.38
molecule: Cytochrome c-550
Organism: Thermosynechococcus elongatus (strain BP-1)

axial ligand #2: HIS

chainID: v,
resSeq: 92,
Coordination distance[Å]: 2.316
molecule: same as ligand #1

List of other hemes in pdb:5e79

ID of heme Distortion Axial ligands on heme Function & structure
5e79-E-103
sad. +1.33
ruf. -0.44
dom. -0.20
bre. +0.04
HIS chainID: E,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 38
pocket vol.: 463.0 Å3
d(Fe-oop): 0.026 Å
HIS chainID: F, resSeq: 24,
molecule: Cytochrome b559 subunit beta
5e79-V-201
sad. +0.43
ruf. -0.25
dom. +0.88
bre. +0.04
HIS chainID: V,
resSeq: 41,
molecule: Cytochrome c-550
electron transporter
oligomeric count: 38
pocket vol.: 453.0 Å3
d(Fe-oop): 0.272 Å
HIS chainID: V, resSeq: 92,
molecule: Cytochrome c-550
5e79-e-102
sad. +1.47
ruf. -0.16
dom. +0.17
bre. -0.04
HIS chainID: e,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 38
pocket vol.: 500.0 Å3
d(Fe-oop): 0.135 Å
HIS chainID: f, resSeq: 24,
molecule: Cytochrome b559 subunit beta