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PyDISH No: 10526

PDB: 5cih,
chainID: D, resSeq: 201
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.6 Å

axial ligand #1: HIS

chainID: D,
resSeq: 18,
Coordination distance[Å]: 2.003
molecule: Cytochrome c iso-1
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

axial ligand #2: MET

chainID: D,
resSeq: 80,
Coordination distance[Å]: 2.254
molecule: same as ligand #1

List of other hemes in pdb:5cih

ID of heme Distortion Axial ligands on heme Function & structure
5cih-A-301
sad. -0.65
ruf. +0.49
dom. +0.16
bre. -0.17
HIS chainID: A,
resSeq: 175,
molecule: Cytochrome c peroxidase, mitochondrial
oxidoreductase
oligomeric count: 2
pocket vol.: 486.0 Å3
d(Fe-oop): 0.059 Å
Not assigned.
5cih-B-201
sad. -0.12
ruf. -0.68
dom. +0.02
bre. -0.23
HIS chainID: B,
resSeq: 18,
molecule: Cytochrome c iso-1
electron transporter
oligomeric count: 2
pocket vol.: 347.0 Å3
d(Fe-oop): 0.047 Å
MET chainID: B, resSeq: 80,
molecule: Cytochrome c iso-1
5cih-C-301
sad. -0.70
ruf. +0.24
dom. -0.06
bre. -0.23
HIS chainID: C,
resSeq: 175,
molecule: Cytochrome c peroxidase, mitochondrial
oxidoreductase
oligomeric count: 2
pocket vol.: 452.0 Å3
d(Fe-oop): 0.116 Å
Not assigned.