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PyDISH No: 10516

PDB: 5cif,
chainID: B, resSeq: 201
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.01 Å

axial ligand #1: HIS

chainID: B,
resSeq: 18,
Coordination distance[Å]: 2.004
molecule: Cytochrome c iso-1
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

axial ligand #2: MET

chainID: B,
resSeq: 80,
Coordination distance[Å]: 2.254
molecule: same as ligand #1

List of other hemes in pdb:5cif

ID of heme Distortion Axial ligands on heme Function & structure
5cif-A-301
sad. -0.82
ruf. +0.41
dom. +0.05
bre. -0.19
HIS chainID: A,
resSeq: 175,
molecule: Cytochrome c peroxidase, mitochondrial
oxidoreductase
oligomeric count: 2
pocket vol.: 441.0 Å3
d(Fe-oop): 0.210 Å
Not assigned.
5cif-C-301
sad. -0.79
ruf. +0.43
dom. +0.13
bre. -0.21
HIS chainID: C,
resSeq: 175,
molecule: Cytochrome c peroxidase, mitochondrial
oxidoreductase
oligomeric count: 2
pocket vol.: 431.0 Å3
d(Fe-oop): 0.195 Å
HOH chainID: C, resSeq: 514,
molecule: water
5cif-D-201
sad. +0.13
ruf. -1.12
dom. +0.06
bre. -0.10
HIS chainID: D,
resSeq: 18,
molecule: Cytochrome c iso-1
electron transporter
oligomeric count: 2
pocket vol.: 329.0 Å3
d(Fe-oop): 0.060 Å
MET chainID: D, resSeq: 80,
molecule: Cytochrome c iso-1