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PyDISH No: 10499

PDB: 5cib,
chainID: A, resSeq: 301
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 3.011 Å

axial ligand #1: HIS

chainID: A,
resSeq: 175,
Coordination distance[Å]: 2.046
molecule: Cytochrome c peroxidase, mitochondrial
EC number: 1.11.1.5
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

List of other hemes in pdb:5cib

ID of heme Distortion Axial ligands on heme Function & structure
5cib-B-201
sad. +0.01
ruf. -0.73
dom. +0.34
bre. -0.18
HIS chainID: B,
resSeq: 18,
molecule: Cytochrome c iso-1
electron transporter
oligomeric count: 4
pocket vol.: 347.0 Å3
d(Fe-oop): 0.120 Å
MET chainID: B, resSeq: 80,
molecule: Cytochrome c iso-1
5cib-C-301
sad. -0.64
ruf. +0.44
dom. -0.16
bre. -0.20
HIS chainID: C,
resSeq: 175,
molecule: Cytochrome c peroxidase, mitochondrial
oxidoreductase
oligomeric count: 4
pocket vol.: 454.0 Å3
d(Fe-oop): 0.076 Å
Not assigned.
5cib-D-201
sad. +0.30
ruf. -0.39
dom. -0.02
bre. -0.24
HIS chainID: D,
resSeq: 18,
molecule: Cytochrome c iso-1
electron transporter
oligomeric count: 4
pocket vol.: 375.0 Å3
d(Fe-oop): 0.241 Å
MET chainID: D, resSeq: 80,
molecule: Cytochrome c iso-1