Browser

PyDISH No: 10491

PDB: 5c9m,
chainID: B, resSeq: 201
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.362 Å

axial ligand #1: HIS

chainID: B,
resSeq: 18,
Coordination distance[Å]: 2.004
molecule: Cytochrome c, somatic
Organism: Rattus norvegicus

axial ligand #2: MET

chainID: B,
resSeq: 80,
Coordination distance[Å]: 2.275
molecule: same as ligand #1

List of other hemes in pdb:5c9m

ID of heme Distortion Axial ligands on heme Function & structure
5c9m-A-201
sad. -0.26
ruf. -0.89
dom. -0.02
bre. +0.01
HIS chainID: A,
resSeq: 18,
molecule: Cytochrome c, somatic
electron transporter
oligomeric count: 1
pocket vol.: 315.0 Å3
d(Fe-oop): 0.015 Å
MET chainID: A, resSeq: 80,
molecule: Cytochrome c, somatic
5c9m-C-201
sad. -0.21
ruf. -0.82
dom. -0.04
bre. -0.00
HIS chainID: C,
resSeq: 18,
molecule: Cytochrome c, somatic
electron transporter
oligomeric count: 1
pocket vol.: 311.0 Å3
d(Fe-oop): 0.015 Å
MET chainID: C, resSeq: 80,
molecule: Cytochrome c, somatic
5c9m-D-201
sad. -0.25
ruf. -0.82
dom. -0.02
bre. +0.01
HIS chainID: D,
resSeq: 18,
molecule: Cytochrome c, somatic
electron transporter
oligomeric count: 1
pocket vol.: 314.0 Å3
d(Fe-oop): 0.021 Å
MET chainID: D, resSeq: 80,
molecule: Cytochrome c, somatic