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PyDISH No: 10482

PDB: 5c2w,
chainID: F, resSeq: 404
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.2 Å

axial ligand #1: HIS

chainID: F,
resSeq: 106,
Coordination distance[Å]: 2.188
molecule: Hypothetical (Di heme) protein
Organism: Candidatus Kuenenia stuttgartiensis

axial ligand #2: HOH

chainID: F,
resSeq: 533,
Coordination distance[Å]: 2.101
molecule: water

List of other hemes in pdb:5c2w

ID of heme Distortion Axial ligands on heme Function & structure
5c2w-A-907
sad. +0.46
ruf. +0.05
dom. +0.17
bre. -0.24
TYR chainID: A,
resSeq: 591,
molecule: HYDRAZINE SYNTHASE ALPHA SUBUNIT
oxidoreductase
oligomeric count: 6
pocket vol.: 419.0 Å3
d(Fe-oop): 0.235 Å
Not assigned.
5c2w-A-908
sad. -0.01
ruf. -0.41
dom. +0.27
bre. -0.25
HIS chainID: A,
resSeq: 689,
molecule: HYDRAZINE SYNTHASE ALPHA SUBUNIT
oxidoreductase
oligomeric count: 6
pocket vol.: 445.0 Å3
d(Fe-oop): 0.045 Å
HIS chainID: A, resSeq: 772,
molecule: HYDRAZINE SYNTHASE ALPHA SUBUNIT
5c2w-C-404
sad. +0.70
ruf. -0.70
dom. +0.21
bre. -0.17
HIS chainID: C,
resSeq: 106,
molecule: Hypothetical (Di heme) protein
electron transporter
oligomeric count: 6
pocket vol.: 386.0 Å3
d(Fe-oop): 0.137 Å
HOH chainID: C, resSeq: 552,
molecule: water
5c2w-C-405
sad. +0.58
ruf. -0.70
dom. +0.57
bre. -0.17
HIS chainID: C,
resSeq: 229,
molecule: Hypothetical (Di heme) protein
electron transporter
oligomeric count: 6
pocket vol.: 401.0 Å3
d(Fe-oop): 0.032 Å
HIS chainID: C, resSeq: 332,
molecule: Hypothetical (Di heme) protein
5c2w-D-907
sad. +0.49
ruf. -0.12
dom. -0.04
bre. -0.24
TYR chainID: D,
resSeq: 591,
molecule: HYDRAZINE SYNTHASE ALPHA SUBUNIT
oxidoreductase
oligomeric count: 6
pocket vol.: 419.0 Å3
d(Fe-oop): 0.174 Å
Not assigned.
5c2w-D-908
sad. +0.09
ruf. -0.15
dom. +0.30
bre. -0.26
HIS chainID: D,
resSeq: 689,
molecule: HYDRAZINE SYNTHASE ALPHA SUBUNIT
oxidoreductase
oligomeric count: 6
pocket vol.: 421.0 Å3
d(Fe-oop): 0.037 Å
HIS chainID: D, resSeq: 772,
molecule: HYDRAZINE SYNTHASE ALPHA SUBUNIT
5c2w-F-405
sad. +0.25
ruf. -0.44
dom. +0.66
bre. -0.20
HIS chainID: F,
resSeq: 229,
molecule: Hypothetical (Di heme) protein
electron transporter
oligomeric count: 6
pocket vol.: 389.0 Å3
d(Fe-oop): 0.067 Å
HIS chainID: F, resSeq: 332,
molecule: Hypothetical (Di heme) protein