Browser

PyDISH No: 10470

PDB: 5c2v,
chainID: C, resSeq: 404
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.7 Å

axial ligand #1: HIS

chainID: C,
resSeq: 106,
Coordination distance[Å]: 2.001
molecule: HYDRAZINE SYNTHASE GAMMA SUBUNIT
Organism: Candidatus Kuenenia stuttgartiensis

axial ligand #2: HOH

chainID: C,
resSeq: 564,
Coordination distance[Å]: 2.097
molecule: water

List of other hemes in pdb:5c2v

ID of heme Distortion Axial ligands on heme Function & structure
5c2v-A-905
sad. +0.63
ruf. +0.28
dom. +0.14
bre. -0.22
TYR chainID: A,
resSeq: 591,
molecule: HYDRAZINE SYNTHASE ALPHA SUBUNIT
oxidoreductase
oligomeric count: 6
pocket vol.: 404.0 Å3
d(Fe-oop): 0.213 Å
Not assigned.
5c2v-A-906
sad. -0.01
ruf. -0.43
dom. +0.21
bre. -0.26
HIS chainID: A,
resSeq: 689,
molecule: HYDRAZINE SYNTHASE ALPHA SUBUNIT
oxidoreductase
oligomeric count: 6
pocket vol.: 440.0 Å3
d(Fe-oop): 0.073 Å
HIS chainID: A, resSeq: 772,
molecule: HYDRAZINE SYNTHASE ALPHA SUBUNIT
5c2v-C-405
sad. +0.57
ruf. -0.71
dom. +0.54
bre. -0.18
HIS chainID: C,
resSeq: 229,
molecule: HYDRAZINE SYNTHASE GAMMA SUBUNIT
electron transporter
oligomeric count: 6
pocket vol.: 389.0 Å3
d(Fe-oop): 0.049 Å
HIS chainID: C, resSeq: 332,
molecule: HYDRAZINE SYNTHASE GAMMA SUBUNIT
5c2v-D-905
sad. +0.64
ruf. +0.10
dom. -0.05
bre. -0.23
TYR chainID: D,
resSeq: 591,
molecule: HYDRAZINE SYNTHASE ALPHA SUBUNIT
oxidoreductase
oligomeric count: 6
pocket vol.: 409.0 Å3
d(Fe-oop): 0.156 Å
Not assigned.
5c2v-D-906
sad. +0.11
ruf. -0.25
dom. +0.24
bre. -0.28
HIS chainID: D,
resSeq: 689,
molecule: HYDRAZINE SYNTHASE ALPHA SUBUNIT
oxidoreductase
oligomeric count: 6
pocket vol.: 426.0 Å3
d(Fe-oop): 0.055 Å
HIS chainID: D, resSeq: 772,
molecule: HYDRAZINE SYNTHASE ALPHA SUBUNIT
5c2v-F-404
sad. +0.76
ruf. -0.66
dom. +0.32
bre. -0.18
HIS chainID: F,
resSeq: 106,
molecule: HYDRAZINE SYNTHASE GAMMA SUBUNIT
electron transporter
oligomeric count: 6
pocket vol.: 401.0 Å3
d(Fe-oop): 0.109 Å
HOH chainID: F, resSeq: 536,
molecule: water
5c2v-F-405
sad. +0.20
ruf. -0.54
dom. +0.73
bre. -0.18
HIS chainID: F,
resSeq: 229,
molecule: HYDRAZINE SYNTHASE GAMMA SUBUNIT
electron transporter
oligomeric count: 6
pocket vol.: 385.0 Å3
d(Fe-oop): 0.059 Å
HIS chainID: F, resSeq: 332,
molecule: HYDRAZINE SYNTHASE GAMMA SUBUNIT