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PyDISH No: 10435

PDB: 5b5n,
chainID: C, resSeq: 502
heme type: B

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.3 Å

axial ligand #1: MET

chainID: C,
resSeq: 130,
Coordination distance[Å]: 2.523
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Thermochromatium tepidum

axial ligand #2: HIS

chainID: C,
resSeq: 156,
Coordination distance[Å]: 2.567
molecule: same as ligand #1

List of other hemes in pdb:5b5n

ID of heme	Distortion	Axial ligands on heme		Function & structure
5b5n-C-501	`sad. -0.02 ruf. -0.00 dom. -0.01 bre. -0.16`	MET	chainID: C, resSeq: 94, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 334.0 Å³ d(Fe-oop): 0.134 Å
5b5n-C-501	`sad. -0.02 ruf. -0.00 dom. -0.01 bre. -0.16`	HIS	chainID: C, resSeq: 111, molecule: Photosynthetic reaction center cytochrome c subunit
5b5n-C-503	`sad. -0.00 ruf. +0.00 dom. -0.01 bre. -0.17`	MET	chainID: C, resSeq: 236, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 371.0 Å³ d(Fe-oop): 0.131 Å
5b5n-C-503	`sad. -0.00 ruf. +0.00 dom. -0.01 bre. -0.17`	HIS	chainID: C, resSeq: 251, molecule: Photosynthetic reaction center cytochrome c subunit
5b5n-C-504	`sad. -0.01 ruf. -0.00 dom. -0.03 bre. -0.08`	HIS	chainID: C, resSeq: 144, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 373.0 Å³ d(Fe-oop): 0.169 Å
5b5n-C-504	`sad. -0.01 ruf. -0.00 dom. -0.03 bre. -0.08`	HIS	chainID: C, resSeq: 311, molecule: Photosynthetic reaction center cytochrome c subunit
5b5n-o-501	`sad. -0.01 ruf. +0.00 dom. -0.03 bre. -0.11`	MET	chainID: o, resSeq: 94, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 369.0 Å³ d(Fe-oop): 0.156 Å
5b5n-o-501	`sad. -0.01 ruf. +0.00 dom. -0.03 bre. -0.11`	HIS	chainID: o, resSeq: 111, molecule: Photosynthetic reaction center cytochrome c subunit
5b5n-o-502	`sad. -0.02 ruf. -0.00 dom. -0.01 bre. -0.13`	MET	chainID: o, resSeq: 130, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 359.0 Å³ d(Fe-oop): 0.125 Å
5b5n-o-502	`sad. -0.02 ruf. -0.00 dom. -0.01 bre. -0.13`	HIS	chainID: o, resSeq: 156, molecule: Photosynthetic reaction center cytochrome c subunit
5b5n-o-503	`sad. -0.01 ruf. -0.01 dom. -0.02 bre. -0.16`	MET	chainID: o, resSeq: 236, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 349.0 Å³ d(Fe-oop): 0.135 Å
5b5n-o-503	`sad. -0.01 ruf. -0.01 dom. -0.02 bre. -0.16`	HIS	chainID: o, resSeq: 251, molecule: Photosynthetic reaction center cytochrome c subunit
5b5n-o-504	`sad. -0.01 ruf. +0.00 dom. -0.01 bre. -0.19`	HIS	chainID: o, resSeq: 144, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 377.0 Å³ d(Fe-oop): 0.134 Å
5b5n-o-504	`sad. -0.01 ruf. +0.00 dom. -0.01 bre. -0.19`	HIS	chainID: o, resSeq: 311, molecule: Photosynthetic reaction center cytochrome c subunit