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PyDISH No: 10416

PDB: 5b3s,
chainID: A, resSeq: 602
heme type: A

distortion

Protein data

function: translocase
experiment: X-RAY DIFFRACTION
resolution: 1.68 Å

axial ligand #1: HIS

chainID: A,
resSeq: 376,
Coordination distance[Å]: 2.089
molecule: Cytochrome c oxidase subunit 1
EC number: 7.1.1.9
Organism: Bos taurus

axial ligand #2: CMO

chainID: A,
resSeq: 606,
Coordination distance[Å]: 1.797
molecule: CARBON MONOXIDE

List of other hemes in pdb:5b3s

ID of heme Distortion Axial ligands on heme Function & structure
5b3s-A-601
 sad. -0.47
ruf. -0.05
dom. +0.24
bre. -0.07
 HIS chainID: A,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1		 translocase
oligomeric count: 13
pocket vol.: 571.0 Å3
d(Fe-oop): 0.036 Å
HIS chainID: A, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
5b3s-N-601
 sad. -0.45
ruf. -0.05
dom. +0.18
bre. -0.06
 HIS chainID: N,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1		 translocase
oligomeric count: 13
pocket vol.: 559.0 Å3
d(Fe-oop): 0.037 Å
HIS chainID: N, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
5b3s-N-602
 sad. -0.38
ruf. -0.00
dom. +0.68
bre. -0.09
 HIS chainID: N,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1		 translocase
oligomeric count: 13
pocket vol.: 702.0 Å3
d(Fe-oop): 0.321 Å
CMO chainID: N, resSeq: 606,
molecule: CARBON MONOXIDE