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PyDISH No: 10412

PDB: 5b3i,
chainID: B, resSeq: 201
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.89 Å

axial ligand #1: TYR

chainID: B,
resSeq: 16,
Coordination distance[Å]: 2.816
molecule: Cytochrome c prime
Organism: Hydrogenophilus thermoluteolus

axial ligand #2: HIS

chainID: B,
resSeq: 128,
Coordination distance[Å]: 2.164
molecule: same as ligand #1

List of other hemes in pdb:5b3i

ID of heme Distortion Axial ligands on heme Function & structure
5b3i-A-201
 sad. -0.19
ruf. -0.37
dom. +0.27
bre. -0.08
 TYR chainID: A,
resSeq: 16,
molecule: Cytochrome c prime		 electron transporter
oligomeric count: 2
pocket vol.: 414.0 Å3
d(Fe-oop): 0.054 Å
HIS chainID: A, resSeq: 128,
molecule: Cytochrome c prime
5b3i-C-201
 sad. -0.19
ruf. -0.48
dom. +0.23
bre. -0.05
 TYR chainID: C,
resSeq: 16,
molecule: Cytochrome c prime		 electron transporter
oligomeric count: 2
pocket vol.: 438.0 Å3
d(Fe-oop): 0.053 Å
HIS chainID: C, resSeq: 128,
molecule: Cytochrome c prime
5b3i-D-201
 sad. -0.15
ruf. -0.55
dom. +0.13
bre. -0.06
 TYR chainID: D,
resSeq: 16,
molecule: Cytochrome c prime		 electron transporter
oligomeric count: 2
pocket vol.: 400.0 Å3
d(Fe-oop): 0.031 Å
HIS chainID: D, resSeq: 128,
molecule: Cytochrome c prime