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PyDISH No: 10394

PDB: 5b1a,
chainID: A, resSeq: 602
heme type: A

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.5 Å

axial ligand #1: HIS

chainID: A,
resSeq: 376,
Coordination distance[Å]: 2.132
molecule: Cytochrome c oxidase subunit 1
EC number: 1.9.3.1
Organism: Bos taurus

axial ligand #2: PER

chainID: A,
resSeq: 606,
Coordination distance[Å]: 2.316
molecule: PEROXIDE ION

List of other hemes in pdb:5b1a

ID of heme Distortion Axial ligands on heme Function & structure
5b1a-A-601
sad. -0.58
ruf. -0.03
dom. +0.26
bre. -0.03
HIS chainID: A,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 548.0 Å3
d(Fe-oop): 0.013 Å
HIS chainID: A, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
5b1a-N-601
sad. -0.58
ruf. -0.04
dom. +0.22
bre. -0.08
HIS chainID: N,
resSeq: 61,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 557.0 Å3
d(Fe-oop): 0.012 Å
HIS chainID: N, resSeq: 378,
molecule: Cytochrome c oxidase subunit 1
5b1a-N-602
sad. -0.39
ruf. -0.10
dom. +0.40
bre. -0.17
HIS chainID: N,
resSeq: 376,
molecule: Cytochrome c oxidase subunit 1
oxidoreductase
oligomeric count: 13
pocket vol.: 660.0 Å3
d(Fe-oop): 0.061 Å
PER chainID: N, resSeq: 606,
molecule: PEROXIDE ION