Browser

select function

select ligand

clear

→ advanced search

PyDISH No: 10312

PDB: 5a13,
chainID: G, resSeq: 250
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.75 Å
origomeric count: 5

axial ligand #1: HIS

chainID: G,
resSeq: 170,
Coordination distance[Å]: 2.166
molecule: CHLORITE DISMUTASE
EC number: 1.13.11.49
Organism: MAGNETOSPIRILLUM SP.

axial ligand #2: SCN

chainID: G,
resSeq: 251,
Coordination distance[Å]: 2.121
molecule: THIOCYANATE ION

List of other hemes in pdb:5a13

ID of heme	Distortion	Axial ligands on heme		Function & structure
5a13-A-250	`sad. -0.35 ruf. +0.31 dom. -0.24 bre. +0.04`	HIS	chainID: A, resSeq: 170, molecule: CHLORITE DISMUTASE	oxidoreductase oligomeric count: 5 pocket vol.: 389.0 Å³ d(Fe-oop): 0.058 Å
5a13-A-250	`sad. -0.35 ruf. +0.31 dom. -0.24 bre. +0.04`	SCN	chainID: A, resSeq: 251, molecule: THIOCYANATE ION
5a13-B-250	`sad. -0.20 ruf. +0.45 dom. -0.12 bre. -0.08`	HIS	chainID: B, resSeq: 170, molecule: CHLORITE DISMUTASE	oxidoreductase oligomeric count: 5 pocket vol.: 393.0 Å³ d(Fe-oop): 0.029 Å
5a13-B-250	`sad. -0.20 ruf. +0.45 dom. -0.12 bre. -0.08`	SCN	chainID: B, resSeq: 251, molecule: THIOCYANATE ION
5a13-C-250	`sad. -0.57 ruf. +0.24 dom. -0.32 bre. -0.01`	HIS	chainID: C, resSeq: 170, molecule: CHLORITE DISMUTASE	oxidoreductase oligomeric count: 5 pocket vol.: 403.0 Å³ d(Fe-oop): 0.060 Å
5a13-C-250	`sad. -0.57 ruf. +0.24 dom. -0.32 bre. -0.01`	SCN	chainID: C, resSeq: 251, molecule: THIOCYANATE ION
5a13-D-250	`sad. -0.15 ruf. +0.44 dom. -0.09 bre. -0.04`	HIS	chainID: D, resSeq: 170, molecule: CHLORITE DISMUTASE	oxidoreductase oligomeric count: 5 pocket vol.: 413.0 Å³ d(Fe-oop): 0.062 Å
5a13-D-250	`sad. -0.15 ruf. +0.44 dom. -0.09 bre. -0.04`	SCN	chainID: D, resSeq: 251, molecule: THIOCYANATE ION
5a13-E-250	`sad. -0.21 ruf. +0.36 dom. -0.20 bre. -0.04`	HIS	chainID: E, resSeq: 170, molecule: CHLORITE DISMUTASE	oxidoreductase oligomeric count: 5 pocket vol.: 400.0 Å³ d(Fe-oop): 0.027 Å
5a13-E-250	`sad. -0.21 ruf. +0.36 dom. -0.20 bre. -0.04`	SCN	chainID: E, resSeq: 251, molecule: THIOCYANATE ION
5a13-F-250	`sad. -0.29 ruf. +0.33 dom. -0.19 bre. +0.01`	HIS	chainID: F, resSeq: 170, molecule: CHLORITE DISMUTASE	oxidoreductase oligomeric count: 5 pocket vol.: 405.0 Å³ d(Fe-oop): 0.042 Å
5a13-F-250	`sad. -0.29 ruf. +0.33 dom. -0.19 bre. +0.01`	SCN	chainID: F, resSeq: 251, molecule: THIOCYANATE ION
5a13-H-250	`sad. -0.35 ruf. +0.25 dom. -0.21 bre. +0.03`	HIS	chainID: H, resSeq: 170, molecule: CHLORITE DISMUTASE	oxidoreductase oligomeric count: 5 pocket vol.: 409.0 Å³ d(Fe-oop): 0.056 Å
5a13-H-250	`sad. -0.35 ruf. +0.25 dom. -0.21 bre. +0.03`	SCN	chainID: H, resSeq: 251, molecule: THIOCYANATE ION
5a13-I-250	`sad. -0.25 ruf. +0.35 dom. -0.13 bre. +0.01`	HIS	chainID: I, resSeq: 170, molecule: CHLORITE DISMUTASE	oxidoreductase oligomeric count: 5 pocket vol.: 400.0 Å³ d(Fe-oop): 0.041 Å
5a13-I-250	`sad. -0.25 ruf. +0.35 dom. -0.13 bre. +0.01`	SCN	chainID: I, resSeq: 251, molecule: THIOCYANATE ION
5a13-J-250	`sad. -0.17 ruf. +0.40 dom. -0.17 bre. +0.00`	HIS	chainID: J, resSeq: 170, molecule: CHLORITE DISMUTASE	oxidoreductase oligomeric count: 5 pocket vol.: 410.0 Å³ d(Fe-oop): 0.030 Å
5a13-J-250	`sad. -0.17 ruf. +0.40 dom. -0.17 bre. +0.00`	SCN	chainID: J, resSeq: 251, molecule: THIOCYANATE ION