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PyDISH No: 10258

PDB: 4yuu,
chainID: E2, resSeq: 101
heme type: B

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 2.77000368116 Å

axial ligand #1: HIS

chainID: E2,
resSeq: 23,
Coordination distance[Å]: 2.719
molecule: Cytochrome b559 subunit alpha
Organism: Cyanidium caldarium

axial ligand #2: HIS

chainID: F2,
resSeq: 24,
Coordination distance[Å]: 3.097
molecule: Cytochrome b559 subunit beta
Organism: Cyanidium caldarium

List of other hemes in pdb:4yuu

ID of heme Distortion Axial ligands on heme Function & structure
4yuu-E1-101
sad. +0.48
ruf. +0.11
dom. -0.46
bre. -0.26
HIS chainID: E1,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 20
pocket vol.: 765.0 Å3
d(Fe-oop): 0.025 Å
HIS chainID: F1, resSeq: 24,
molecule: Cytochrome b559 subunit beta
4yuu-V1-201
sad. +0.39
ruf. +0.02
dom. +0.48
bre. -0.24
HIS chainID: V1,
resSeq: 41,
molecule: Cytochrome c-550
electron transporter
oligomeric count: 20
pocket vol.: 470.0 Å3
d(Fe-oop): 0.057 Å
HIS chainID: V1, resSeq: 92,
molecule: Cytochrome c-550
4yuu-f1-101
sad. +0.47
ruf. -0.02
dom. -0.36
bre. -0.28
HIS chainID: f1,
resSeq: 24,
molecule: Cytochrome b559 subunit beta
electron transporter
oligomeric count: 21
pocket vol.: 757.0 Å3
d(Fe-oop): 0.096 Å
Not assigned.
4yuu-v1-201
sad. +0.47
ruf. -0.09
dom. +0.54
bre. -0.23
HIS chainID: v1,
resSeq: 41,
molecule: Cytochrome c-550
electron transporter
oligomeric count: 21
pocket vol.: 505.0 Å3
d(Fe-oop): 0.058 Å
HIS chainID: v1, resSeq: 92,
molecule: Cytochrome c-550
4yuu-V2-201
sad. +0.46
ruf. -0.09
dom. +0.48
bre. -0.25
HIS chainID: V2,
resSeq: 41,
molecule: Cytochrome c-550
electron transporter
oligomeric count: 22
pocket vol.: 568.0 Å3
d(Fe-oop): 0.044 Å
HIS chainID: V2, resSeq: 92,
molecule: Cytochrome c-550
4yuu-e2-101
sad. +0.51
ruf. +0.38
dom. -0.04
bre. -0.26
HIS chainID: e2,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 21
pocket vol.: 758.0 Å3
d(Fe-oop): 0.011 Å
HIS chainID: f2, resSeq: 24,
molecule: Cytochrome b559 subunit beta
4yuu-v2-201
sad. +0.33
ruf. -0.04
dom. +0.45
bre. -0.24
HIS chainID: v2,
resSeq: 41,
molecule: Cytochrome c-550
electron transporter
oligomeric count: 21
pocket vol.: 483.0 Å3
d(Fe-oop): 0.060 Å
HIS chainID: v2, resSeq: 92,
molecule: Cytochrome c-550