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PyDISH No: 10200

PDB: 4xyd,
chainID: B, resSeq: 201
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.85 Å

axial ligand #1: HIS

chainID: B,
resSeq: 66,
Coordination distance[Å]: 1.875
molecule: NorC-like protein
EC number: 1.7.2.5
Organism: Roseobacter denitrificans (strain ATCC 33942 / OCh 114)

axial ligand #2: MET

chainID: B,
resSeq: 116,
Coordination distance[Å]: 2.254
molecule: same as ligand #1

List of other hemes in pdb:4xyd

ID of heme Distortion Axial ligands on heme Function & structure
4xyd-A-501
sad. +0.00
ruf. +0.66
dom. +0.25
bre. +0.04
HIS chainID: A,
resSeq: 53,
molecule: Nitric-oxide reductase subunit B
oxidoreductase
oligomeric count: 2
pocket vol.: 389.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: A, resSeq: 336,
molecule: Nitric-oxide reductase subunit B
4xyd-A-504
sad. -0.26
ruf. +1.14
dom. +0.26
bre. +0.01
HIS chainID: A,
resSeq: 334,
molecule: Nitric-oxide reductase subunit B
oxidoreductase
oligomeric count: 2
pocket vol.: 394.0 Å3
d(Fe-oop): 0.014 Å
UNL chainID: A, resSeq: 502,
molecule: UNKNOWN LIGAND