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PyDISH No: 10193

PDB: 4xva,
chainID: A, resSeq: 1201
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.66 Å

axial ligand #1: HIS

chainID: A,
resSeq: 175,
Coordination distance[Å]: 2.206
molecule: Cytochrome c peroxidase, mitochondrial
EC number: 1.11.1.5
Organism: Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

axial ligand #2: HOH

chainID: A,
resSeq: 1343,
Coordination distance[Å]: 2.391
molecule: water

List of other hemes in pdb:4xva

ID of heme Distortion Axial ligands on heme Function & structure
4xva-C-1201
sad. -0.42
ruf. +0.29
dom. +0.21
bre. +0.22
HIS chainID: C,
resSeq: 175,
molecule: Cytochrome c peroxidase, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 425.0 Å3
d(Fe-oop): 0.009 Å
HOH chainID: C, resSeq: 1375,
molecule: water
4xva-E-1201
sad. -0.53
ruf. +0.49
dom. +0.38
bre. +0.35
HIS chainID: E,
resSeq: 175,
molecule: Cytochrome c peroxidase, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 442.0 Å3
d(Fe-oop): 0.019 Å
Not assigned.
4xva-G-1201
sad. -0.30
ruf. +0.33
dom. +0.27
bre. +0.26
HIS chainID: G,
resSeq: 175,
molecule: Cytochrome c peroxidase, mitochondrial
oxidoreductase
oligomeric count: 1
pocket vol.: 450.0 Å3
d(Fe-oop): 0.019 Å
HOH chainID: G, resSeq: 1309,
molecule: water