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PyDISH No: 10082

PDB: 4v8k,
chainID: BC, resSeq: 504
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 3.006 Å
origomeric count: 36

axial ligand #1: HIS

chainID: BC,
resSeq: 144,
Coordination distance[Å]: 2.066
molecule: Photosynthetic reaction center cytochrome c subunit
Organism: Thermochromatium tepidum

axial ligand #2: HIS

chainID: BC,
resSeq: 311,
Coordination distance[Å]: 2.145
molecule: same as ligand #1

List of other hemes in pdb:4v8k

ID of heme	Distortion	Axial ligands on heme		Function & structure
4v8k-AC-501	`sad. +0.39 ruf. -0.09 dom. +0.02 bre. -0.01`	MET	chainID: AC, resSeq: 94, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 332.0 Å³ d(Fe-oop): 0.012 Å
4v8k-AC-501	`sad. +0.39 ruf. -0.09 dom. +0.02 bre. -0.01`	HIS	chainID: AC, resSeq: 111, molecule: Photosynthetic reaction center cytochrome c subunit
4v8k-AC-502	`sad. +0.21 ruf. +0.00 dom. -0.02 bre. +0.01`	MET	chainID: AC, resSeq: 130, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 345.0 Å³ d(Fe-oop): 0.003 Å
4v8k-AC-502	`sad. +0.21 ruf. +0.00 dom. -0.02 bre. +0.01`	HIS	chainID: AC, resSeq: 156, molecule: Photosynthetic reaction center cytochrome c subunit
4v8k-AC-503	`sad. +0.14 ruf. -0.14 dom. -0.01 bre. -0.01`	MET	chainID: AC, resSeq: 236, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 304.0 Å³ d(Fe-oop): 0.001 Å
4v8k-AC-503	`sad. +0.14 ruf. -0.14 dom. -0.01 bre. -0.01`	HIS	chainID: AC, resSeq: 251, molecule: Photosynthetic reaction center cytochrome c subunit
4v8k-AC-504	`sad. -0.36 ruf. -0.02 dom. -0.09 bre. -0.02`	HIS	chainID: AC, resSeq: 144, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 406.0 Å³ d(Fe-oop): 0.035 Å
4v8k-AC-504	`sad. -0.36 ruf. -0.02 dom. -0.09 bre. -0.02`	HIS	chainID: AC, resSeq: 311, molecule: Photosynthetic reaction center cytochrome c subunit
4v8k-BC-501	`sad. +0.43 ruf. -0.11 dom. -0.00 bre. -0.03`	MET	chainID: BC, resSeq: 94, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 313.0 Å³ d(Fe-oop): 0.003 Å
4v8k-BC-501	`sad. +0.43 ruf. -0.11 dom. -0.00 bre. -0.03`	HIS	chainID: BC, resSeq: 111, molecule: Photosynthetic reaction center cytochrome c subunit
4v8k-BC-502	`sad. +0.27 ruf. -0.11 dom. -0.02 bre. +0.03`	MET	chainID: BC, resSeq: 130, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 320.0 Å³ d(Fe-oop): 0.001 Å
4v8k-BC-502	`sad. +0.27 ruf. -0.11 dom. -0.02 bre. +0.03`	HIS	chainID: BC, resSeq: 156, molecule: Photosynthetic reaction center cytochrome c subunit
4v8k-BC-503	`sad. +0.06 ruf. -0.14 dom. -0.00 bre. -0.06`	MET	chainID: BC, resSeq: 236, molecule: Photosynthetic reaction center cytochrome c subunit	electron transporter oligomeric count: 36 pocket vol.: 320.0 Å³ d(Fe-oop): 0.016 Å
4v8k-BC-503	`sad. +0.06 ruf. -0.14 dom. -0.00 bre. -0.06`	HIS	chainID: BC, resSeq: 251, molecule: Photosynthetic reaction center cytochrome c subunit