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PyDISH No: 09939

PDB: 4ub8,
chainID: v, resSeq: 202
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.95 Å

axial ligand #1: HIS

chainID: v,
resSeq: 41,
Coordination distance[Å]: 2.082
molecule: Cytochrome c-550
Organism: Thermosynechococcus vulcanus

axial ligand #2: HIS

chainID: v,
resSeq: 92,
Coordination distance[Å]: 2.103
molecule: same as ligand #1

List of other hemes in pdb:4ub8

ID of heme Distortion Axial ligands on heme Function & structure
4ub8-E-103
sad. +0.85
ruf. -0.19
dom. +0.04
bre. +0.01
HIS chainID: E,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 20
pocket vol.: 458.0 Å3
d(Fe-oop): 0.071 Å
HIS chainID: F, resSeq: 24,
molecule: Cytochrome b559 subunit beta
4ub8-V-203
sad. +0.39
ruf. -0.53
dom. +0.07
bre. -0.10
HIS chainID: V,
resSeq: 41,
molecule: Cytochrome c-550
electron transporter
oligomeric count: 20
pocket vol.: 401.0 Å3
d(Fe-oop): 0.058 Å
HIS chainID: V, resSeq: 92,
molecule: Cytochrome c-550
4ub8-e-102
sad. +0.63
ruf. -0.15
dom. +0.09
bre. -0.06
HIS chainID: e,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 19
pocket vol.: 541.0 Å3
d(Fe-oop): 0.063 Å
HIS chainID: f, resSeq: 24,
molecule: Cytochrome b559 subunit beta