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PyDISH No: 09937

PDB: 4ub8,
chainID: V, resSeq: 203
heme type: C

distortion

Protein data

function: electron transporter
experiment: X-RAY DIFFRACTION
resolution: 1.95 Å

axial ligand #1: HIS

chainID: V,
resSeq: 41,
Coordination distance[Å]: 2.089
molecule: Cytochrome c-550
Organism: Thermosynechococcus vulcanus

axial ligand #2: HIS

chainID: V,
resSeq: 92,
Coordination distance[Å]: 2.101
molecule: same as ligand #1

List of other hemes in pdb:4ub8

ID of heme Distortion Axial ligands on heme Function & structure
4ub8-E-103
sad. +0.85
ruf. -0.19
dom. +0.04
bre. +0.01
HIS chainID: E,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 20
pocket vol.: 458.0 Å3
d(Fe-oop): 0.071 Å
HIS chainID: F, resSeq: 24,
molecule: Cytochrome b559 subunit beta
4ub8-e-102
sad. +0.63
ruf. -0.15
dom. +0.09
bre. -0.06
HIS chainID: e,
resSeq: 23,
molecule: Cytochrome b559 subunit alpha
electron transporter
oligomeric count: 19
pocket vol.: 541.0 Å3
d(Fe-oop): 0.063 Å
HIS chainID: f, resSeq: 24,
molecule: Cytochrome b559 subunit beta
4ub8-v-202
sad. +0.41
ruf. -0.59
dom. +0.08
bre. -0.08
HIS chainID: v,
resSeq: 41,
molecule: Cytochrome c-550
electron transporter
oligomeric count: 19
pocket vol.: 450.0 Å3
d(Fe-oop): 0.050 Å
HIS chainID: v, resSeq: 92,
molecule: Cytochrome c-550