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PyDISH No: 09572

PDB: 4qop,
chainID: B, resSeq: 501
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.9 Å

axial ligand #1: TYR

chainID: B,
resSeq: 340,
Coordination distance[Å]: 2.173
molecule: Catalase
EC number: 1.11.1.6
Organism: Bacillus pumilus

axial ligand #2: HOH

chainID: B,
resSeq: 936,
Coordination distance[Å]: 2.412
molecule: water

List of other hemes in pdb:4qop

ID of heme Distortion Axial ligands on heme Function & structure
4qop-A-501
sad. -0.12
ruf. +0.38
dom. +0.26
bre. -0.05
TYR chainID: A,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 350.0 Å3
d(Fe-oop): 0.016 Å
Not assigned.
4qop-A-502
sad. +0.20
ruf. -0.44
dom. -0.35
bre. -0.02
TYR chainID: A,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 348.0 Å3
d(Fe-oop): 0.042 Å
Not assigned.
4qop-B-502
sad. +0.19
ruf. -0.47
dom. -0.30
bre. -0.04
TYR chainID: B,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 345.0 Å3
d(Fe-oop): 0.051 Å
HOH chainID: B, resSeq: 936,
molecule: water
4qop-C-501
sad. -0.03
ruf. +0.35
dom. +0.40
bre. -0.04
TYR chainID: C,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 349.0 Å3
d(Fe-oop): 0.029 Å
HOH chainID: C, resSeq: 962,
molecule: water
4qop-C-502
sad. +0.21
ruf. -0.55
dom. -0.29
bre. -0.08
TYR chainID: C,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 352.0 Å3
d(Fe-oop): 0.041 Å
HOH chainID: C, resSeq: 962,
molecule: water
4qop-D-501
sad. -0.19
ruf. +0.33
dom. +0.52
bre. +0.03
TYR chainID: D,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 350.0 Å3
d(Fe-oop): 0.017 Å
HOH chainID: D, resSeq: 932,
molecule: water
4qop-D-502
sad. +0.09
ruf. -0.36
dom. -0.10
bre. +0.01
TYR chainID: D,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 354.0 Å3
d(Fe-oop): 0.061 Å
Not assigned.