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PyDISH No: 09568

PDB: 4qoo,
chainID: D, resSeq: 501
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.75 Å

axial ligand #1: TYR

chainID: D,
resSeq: 340,
Coordination distance[Å]: 2.327
molecule: Catalase
EC number: 1.11.1.6
Organism: Bacillus pumilus

axial ligand #2: HOH

chainID: D,
resSeq: 952,
Coordination distance[Å]: 2.365
molecule: water

List of other hemes in pdb:4qoo

ID of heme Distortion Axial ligands on heme Function & structure
4qoo-A-501
sad. -0.17
ruf. +0.50
dom. +0.21
bre. +0.02
TYR chainID: A,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 337.0 Å3
d(Fe-oop): 0.025 Å
Not assigned.
4qoo-A-502
sad. +0.16
ruf. -0.45
dom. -0.39
bre. +0.03
TYR chainID: A,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 343.0 Å3
d(Fe-oop): 0.002 Å
Not assigned.
4qoo-B-501
sad. -0.23
ruf. +0.38
dom. +0.42
bre. +0.01
TYR chainID: B,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 351.0 Å3
d(Fe-oop): 0.012 Å
HOH chainID: B, resSeq: 954,
molecule: water
4qoo-B-502
sad. +0.21
ruf. -0.45
dom. -0.18
bre. -0.08
TYR chainID: B,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 347.0 Å3
d(Fe-oop): 0.023 Å
HOH chainID: B, resSeq: 954,
molecule: water
4qoo-C-501
sad. -0.11
ruf. +0.22
dom. +0.41
bre. -0.05
TYR chainID: C,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 344.0 Å3
d(Fe-oop): 0.002 Å
Not assigned.
4qoo-C-502
sad. +0.21
ruf. -0.76
dom. -0.12
bre. -0.00
TYR chainID: C,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 335.0 Å3
d(Fe-oop): 0.025 Å
Not assigned.
4qoo-D-502
sad. +0.16
ruf. -0.45
dom. -0.14
bre. -0.12
TYR chainID: D,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 342.0 Å3
d(Fe-oop): 0.018 Å
HOH chainID: D, resSeq: 952,
molecule: water