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PyDISH No: 09548

PDB: 4qom,
chainID: B, resSeq: 501
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.65 Å

axial ligand #1: TYR

chainID: B,
resSeq: 340,
Coordination distance[Å]: 2.279
molecule: Catalase
EC number: 1.11.1.6
Organism: Bacillus pumilus

axial ligand #2: PYG

chainID: B,
resSeq: 504,
Coordination distance[Å]: 2.616
molecule: BENZENE-1,2,3-TRIOL

List of other hemes in pdb:4qom

ID of heme Distortion Axial ligands on heme Function & structure
4qom-A-501
sad. -0.14
ruf. +0.78
dom. +0.24
bre. +0.02
TYR chainID: A,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 320.0 Å3
d(Fe-oop): 0.025 Å
PYG chainID: A, resSeq: 504,
molecule: BENZENE-1,2,3-TRIOL
4qom-A-502
sad. +0.21
ruf. -0.22
dom. -0.23
bre. -0.01
TYR chainID: A,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 321.0 Å3
d(Fe-oop): 0.016 Å
PYG chainID: A, resSeq: 504,
molecule: BENZENE-1,2,3-TRIOL
4qom-B-502
sad. +0.18
ruf. -0.67
dom. -0.08
bre. -0.06
TYR chainID: B,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 343.0 Å3
d(Fe-oop): 0.024 Å
Not assigned.
4qom-C-501
sad. -0.10
ruf. +0.42
dom. +0.43
bre. -0.08
TYR chainID: C,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 316.0 Å3
d(Fe-oop): 0.014 Å
PYG chainID: C, resSeq: 504,
molecule: BENZENE-1,2,3-TRIOL
4qom-C-502
sad. +0.17
ruf. -0.66
dom. -0.11
bre. -0.06
TYR chainID: C,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 322.0 Å3
d(Fe-oop): 0.027 Å
Not assigned.
4qom-D-501
sad. -0.14
ruf. +0.50
dom. +0.47
bre. -0.05
TYR chainID: D,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 332.0 Å3
d(Fe-oop): 0.004 Å
PYG chainID: D, resSeq: 504,
molecule: BENZENE-1,2,3-TRIOL
4qom-D-502
sad. +0.14
ruf. -0.46
dom. -0.13
bre. -0.08
TYR chainID: D,
resSeq: 340,
molecule: Catalase
oxidoreductase
oligomeric count: 4
pocket vol.: 330.0 Å3
d(Fe-oop): 0.023 Å
PYG chainID: D, resSeq: 504,
molecule: BENZENE-1,2,3-TRIOL