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Protein data
function: oxidoreductaseexperiment: X-RAY DIFFRACTION
resolution: 1.7 Å
axial ligand #1: HIS
chainID: B,resSeq: 30,
Coordination distance[Å]: 1.958
molecule: Eight-heme nitrite reductase
Organism: Thioalkalivibrio nitratireducens
axial ligand #2: HIS
chainID: B,resSeq: 70,
Coordination distance[Å]: 1.965
molecule: same as ligand #1
List of other hemes in pdb:4q0t
ID of heme | Distortion | Axial ligands on heme | Function & structure | |
---|---|---|---|---|
4q0t-A-601 |
sad. +0.52 ruf. -0.56 dom. +0.09 bre. -0.33 |
LYS | chainID: A, resSeq: 188, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 406.0 Å3 d(Fe-oop): 0.009 Å |
HOH | chainID: A, resSeq: 701, molecule: water |
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4q0t-A-602 |
sad. +1.06 ruf. -0.51 dom. -0.10 bre. -0.23 |
HIS | chainID: A, resSeq: 231, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 466.0 Å3 d(Fe-oop): 0.026 Å |
HIS | chainID: A, resSeq: 398, molecule: Eight-heme nitrite reductase |
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4q0t-A-603 |
sad. -0.21 ruf. -0.95 dom. +0.10 bre. -0.31 |
HIS | chainID: A, resSeq: 119, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 437.0 Å3 d(Fe-oop): 0.007 Å |
HIS | chainID: A, resSeq: 300, molecule: Eight-heme nitrite reductase |
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4q0t-A-604 |
sad. +0.70 ruf. -0.90 dom. -0.22 bre. -0.24 |
HIS | chainID: A, resSeq: 383, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 419.0 Å3 d(Fe-oop): 0.004 Å |
HIS | chainID: A, resSeq: 491, molecule: Eight-heme nitrite reductase |
|||
4q0t-A-605 |
sad. -0.37 ruf. -1.22 dom. +0.03 bre. -0.51 |
HIS | chainID: A, resSeq: 372, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 481.0 Å3 d(Fe-oop): 0.011 Å |
HIS | chainID: A, resSeq: 415, molecule: Eight-heme nitrite reductase |
|||
4q0t-A-606 |
sad. -0.15 ruf. -0.59 dom. -0.10 bre. -0.37 |
HIS | chainID: A, resSeq: 39, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 366.0 Å3 d(Fe-oop): 0.013 Å |
HIS | chainID: A, resSeq: 234, molecule: Eight-heme nitrite reductase |
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4q0t-A-607 |
sad. +0.29 ruf. -0.70 dom. -0.10 bre. -0.29 |
HIS | chainID: A, resSeq: 30, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 506.0 Å3 d(Fe-oop): 0.014 Å |
HIS | chainID: A, resSeq: 70, molecule: Eight-heme nitrite reductase |
|||
4q0t-A-608 |
sad. +0.04 ruf. -0.54 dom. -0.15 bre. -0.41 |
HIS | chainID: A, resSeq: 18, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 438.0 Å3 d(Fe-oop): 0.007 Å |
HIS | chainID: A, resSeq: 44, molecule: Eight-heme nitrite reductase |
|||
4q0t-B-601 |
sad. +0.51 ruf. -0.52 dom. +0.08 bre. -0.30 |
LYS | chainID: B, resSeq: 188, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 417.0 Å3 d(Fe-oop): 0.002 Å |
HOH | chainID: B, resSeq: 701, molecule: water |
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4q0t-B-602 |
sad. +1.09 ruf. -0.47 dom. -0.11 bre. -0.21 |
HIS | chainID: B, resSeq: 231, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 487.0 Å3 d(Fe-oop): 0.027 Å |
HIS | chainID: B, resSeq: 398, molecule: Eight-heme nitrite reductase |
|||
4q0t-B-603 |
sad. -0.25 ruf. -0.93 dom. +0.11 bre. -0.22 |
HIS | chainID: B, resSeq: 119, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 424.0 Å3 d(Fe-oop): 0.011 Å |
HIS | chainID: B, resSeq: 300, molecule: Eight-heme nitrite reductase |
|||
4q0t-B-604 |
sad. +0.72 ruf. -0.87 dom. -0.19 bre. -0.27 |
HIS | chainID: B, resSeq: 383, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 436.0 Å3 d(Fe-oop): 0.009 Å |
HIS | chainID: B, resSeq: 491, molecule: Eight-heme nitrite reductase |
|||
4q0t-B-605 |
sad. -0.37 ruf. -1.27 dom. -0.04 bre. -0.46 |
HIS | chainID: B, resSeq: 372, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 476.0 Å3 d(Fe-oop): 0.012 Å |
HIS | chainID: B, resSeq: 415, molecule: Eight-heme nitrite reductase |
|||
4q0t-B-606 |
sad. -0.10 ruf. -0.55 dom. -0.11 bre. -0.36 |
HIS | chainID: B, resSeq: 39, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 368.0 Å3 d(Fe-oop): 0.012 Å |
HIS | chainID: B, resSeq: 234, molecule: Eight-heme nitrite reductase |
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4q0t-B-608 |
sad. -0.11 ruf. -0.47 dom. -0.15 bre. -0.42 |
HIS | chainID: B, resSeq: 18, molecule: Eight-heme nitrite reductase |
oxidoreductase oligomeric count: 6 pocket vol.: 431.0 Å3 d(Fe-oop): 0.004 Å |
HIS | chainID: B, resSeq: 44, molecule: Eight-heme nitrite reductase |