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PyDISH No: 09426

PDB: 4q0t,
chainID: A, resSeq: 606
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 1.7 Å

axial ligand #1: HIS

chainID: A,
resSeq: 39,
Coordination distance[Å]: 1.928
molecule: Eight-heme nitrite reductase
Organism: Thioalkalivibrio nitratireducens

axial ligand #2: HIS

chainID: A,
resSeq: 234,
Coordination distance[Å]: 1.947
molecule: same as ligand #1

List of other hemes in pdb:4q0t

ID of heme	Distortion	Axial ligands on heme		Function & structure
4q0t-A-601	`sad. +0.52 ruf. -0.56 dom. +0.09 bre. -0.33`	LYS	chainID: A, resSeq: 188, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 406.0 Å³ d(Fe-oop): 0.009 Å
4q0t-A-601	`sad. +0.52 ruf. -0.56 dom. +0.09 bre. -0.33`	HOH	chainID: A, resSeq: 701, molecule: water
4q0t-A-602	`sad. +1.06 ruf. -0.51 dom. -0.10 bre. -0.23`	HIS	chainID: A, resSeq: 231, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 466.0 Å³ d(Fe-oop): 0.026 Å
4q0t-A-602	`sad. +1.06 ruf. -0.51 dom. -0.10 bre. -0.23`	HIS	chainID: A, resSeq: 398, molecule: Eight-heme nitrite reductase
4q0t-A-603	`sad. -0.21 ruf. -0.95 dom. +0.10 bre. -0.31`	HIS	chainID: A, resSeq: 119, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 437.0 Å³ d(Fe-oop): 0.007 Å
4q0t-A-603	`sad. -0.21 ruf. -0.95 dom. +0.10 bre. -0.31`	HIS	chainID: A, resSeq: 300, molecule: Eight-heme nitrite reductase
4q0t-A-604	`sad. +0.70 ruf. -0.90 dom. -0.22 bre. -0.24`	HIS	chainID: A, resSeq: 383, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 419.0 Å³ d(Fe-oop): 0.004 Å
4q0t-A-604	`sad. +0.70 ruf. -0.90 dom. -0.22 bre. -0.24`	HIS	chainID: A, resSeq: 491, molecule: Eight-heme nitrite reductase
4q0t-A-605	`sad. -0.37 ruf. -1.22 dom. +0.03 bre. -0.51`	HIS	chainID: A, resSeq: 372, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 481.0 Å³ d(Fe-oop): 0.011 Å
4q0t-A-605	`sad. -0.37 ruf. -1.22 dom. +0.03 bre. -0.51`	HIS	chainID: A, resSeq: 415, molecule: Eight-heme nitrite reductase
4q0t-A-607	`sad. +0.29 ruf. -0.70 dom. -0.10 bre. -0.29`	HIS	chainID: A, resSeq: 30, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 506.0 Å³ d(Fe-oop): 0.014 Å
4q0t-A-607	`sad. +0.29 ruf. -0.70 dom. -0.10 bre. -0.29`	HIS	chainID: A, resSeq: 70, molecule: Eight-heme nitrite reductase
4q0t-A-608	`sad. +0.04 ruf. -0.54 dom. -0.15 bre. -0.41`	HIS	chainID: A, resSeq: 18, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 438.0 Å³ d(Fe-oop): 0.007 Å
4q0t-A-608	`sad. +0.04 ruf. -0.54 dom. -0.15 bre. -0.41`	HIS	chainID: A, resSeq: 44, molecule: Eight-heme nitrite reductase
4q0t-B-601	`sad. +0.51 ruf. -0.52 dom. +0.08 bre. -0.30`	LYS	chainID: B, resSeq: 188, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 417.0 Å³ d(Fe-oop): 0.002 Å
4q0t-B-601	`sad. +0.51 ruf. -0.52 dom. +0.08 bre. -0.30`	HOH	chainID: B, resSeq: 701, molecule: water
4q0t-B-602	`sad. +1.09 ruf. -0.47 dom. -0.11 bre. -0.21`	HIS	chainID: B, resSeq: 231, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 487.0 Å³ d(Fe-oop): 0.027 Å
4q0t-B-602	`sad. +1.09 ruf. -0.47 dom. -0.11 bre. -0.21`	HIS	chainID: B, resSeq: 398, molecule: Eight-heme nitrite reductase
4q0t-B-603	`sad. -0.25 ruf. -0.93 dom. +0.11 bre. -0.22`	HIS	chainID: B, resSeq: 119, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 424.0 Å³ d(Fe-oop): 0.011 Å
4q0t-B-603	`sad. -0.25 ruf. -0.93 dom. +0.11 bre. -0.22`	HIS	chainID: B, resSeq: 300, molecule: Eight-heme nitrite reductase
4q0t-B-604	`sad. +0.72 ruf. -0.87 dom. -0.19 bre. -0.27`	HIS	chainID: B, resSeq: 383, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 436.0 Å³ d(Fe-oop): 0.009 Å
4q0t-B-604	`sad. +0.72 ruf. -0.87 dom. -0.19 bre. -0.27`	HIS	chainID: B, resSeq: 491, molecule: Eight-heme nitrite reductase
4q0t-B-605	`sad. -0.37 ruf. -1.27 dom. -0.04 bre. -0.46`	HIS	chainID: B, resSeq: 372, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 476.0 Å³ d(Fe-oop): 0.012 Å
4q0t-B-605	`sad. -0.37 ruf. -1.27 dom. -0.04 bre. -0.46`	HIS	chainID: B, resSeq: 415, molecule: Eight-heme nitrite reductase
4q0t-B-606	`sad. -0.10 ruf. -0.55 dom. -0.11 bre. -0.36`	HIS	chainID: B, resSeq: 39, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 368.0 Å³ d(Fe-oop): 0.012 Å
4q0t-B-606	`sad. -0.10 ruf. -0.55 dom. -0.11 bre. -0.36`	HIS	chainID: B, resSeq: 234, molecule: Eight-heme nitrite reductase
4q0t-B-607	`sad. +0.29 ruf. -0.68 dom. -0.11 bre. -0.29`	HIS	chainID: B, resSeq: 30, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 506.0 Å³ d(Fe-oop): 0.008 Å
4q0t-B-607	`sad. +0.29 ruf. -0.68 dom. -0.11 bre. -0.29`	HIS	chainID: B, resSeq: 70, molecule: Eight-heme nitrite reductase
4q0t-B-608	`sad. -0.11 ruf. -0.47 dom. -0.15 bre. -0.42`	HIS	chainID: B, resSeq: 18, molecule: Eight-heme nitrite reductase	oxidoreductase oligomeric count: 6 pocket vol.: 431.0 Å³ d(Fe-oop): 0.004 Å
4q0t-B-608	`sad. -0.11 ruf. -0.47 dom. -0.15 bre. -0.42`	HIS	chainID: B, resSeq: 44, molecule: Eight-heme nitrite reductase