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PyDISH No: 09200

PDB: 4n4n,
chainID: C, resSeq: 604
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.2 Å

axial ligand #1: HIS

chainID: C,
resSeq: 107,
Coordination distance[Å]: 1.876
molecule: Hydroxylamine oxidoreductase
EC number: 1.7.2.6
Organism: Nitrosomonas europaea

axial ligand #2: HIS

chainID: C,
resSeq: 184,
Coordination distance[Å]: 1.881
molecule: same as ligand #1

List of other hemes in pdb:4n4n

ID of heme Distortion Axial ligands on heme Function & structure
4n4n-A-601
sad. +0.53
ruf. -0.40
dom. +0.32
bre. -0.24
HIS chainID: A,
resSeq: 267,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 438.0 Å3
d(Fe-oop): 0.003 Å
HIS chainID: A, resSeq: 347,
molecule: Hydroxylamine oxidoreductase
4n4n-A-602
sad. -0.19
ruf. -0.95
dom. -0.23
bre. -0.18
HIS chainID: A,
resSeq: 123,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 383.0 Å3
d(Fe-oop): 0.002 Å
HIS chainID: A, resSeq: 200,
molecule: Hydroxylamine oxidoreductase
4n4n-A-603
sad. +0.10
ruf. -0.81
dom. -0.12
bre. -0.22
HIS chainID: A,
resSeq: 107,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 430.0 Å3
d(Fe-oop): 0.020 Å
HIS chainID: A, resSeq: 184,
molecule: Hydroxylamine oxidoreductase
4n4n-A-604
sad. +0.40
ruf. -0.18
dom. -0.02
bre. -0.30
HIS chainID: A,
resSeq: 173,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 340.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: A, resSeq: 270,
molecule: Hydroxylamine oxidoreductase
4n4n-A-605
sad. +0.96
ruf. -1.12
dom. -0.20
bre. -0.10
HIS chainID: A,
resSeq: 338,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 402.0 Å3
d(Fe-oop): 0.002 Å
HIS chainID: A, resSeq: 483,
molecule: Hydroxylamine oxidoreductase
4n4n-A-606
sad. -0.30
ruf. -0.81
dom. -0.23
bre. -0.21
HIS chainID: A,
resSeq: 228,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 427.0 Å3
d(Fe-oop): 0.006 Å
HIS chainID: A, resSeq: 287,
molecule: Hydroxylamine oxidoreductase
4n4n-A-607
sad. +0.25
ruf. -0.87
dom. -0.20
bre. -0.22
HIS chainID: A,
resSeq: 303,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 390.0 Å3
d(Fe-oop): 0.002 Å
HIS chainID: A, resSeq: 388,
molecule: Hydroxylamine oxidoreductase
4n4n-A-608
sad. -0.04
ruf. -2.23
dom. +0.09
bre. +0.42
HIS chainID: E,
resSeq: 257,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 438.0 Å3
d(Fe-oop): 0.049 Å
HOH chainID: A, resSeq: 971,
molecule: water
4n4n-C-601
sad. -0.10
ruf. -1.98
dom. +0.12
bre. +0.36
HIS chainID: A,
resSeq: 257,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 426.0 Å3
d(Fe-oop): 0.041 Å
HOH chainID: A, resSeq: 968,
molecule: water
4n4n-C-602
sad. +0.48
ruf. -0.50
dom. +0.35
bre. -0.21
HIS chainID: C,
resSeq: 267,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 413.0 Å3
d(Fe-oop): 0.002 Å
HIS chainID: C, resSeq: 347,
molecule: Hydroxylamine oxidoreductase
4n4n-C-603
sad. -0.12
ruf. -0.95
dom. -0.26
bre. -0.19
HIS chainID: C,
resSeq: 123,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 384.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: C, resSeq: 200,
molecule: Hydroxylamine oxidoreductase
4n4n-C-605
sad. +0.42
ruf. -0.35
dom. +0.00
bre. -0.28
HIS chainID: C,
resSeq: 173,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 326.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: C, resSeq: 270,
molecule: Hydroxylamine oxidoreductase
4n4n-C-606
sad. +0.94
ruf. -1.04
dom. -0.19
bre. -0.12
HIS chainID: C,
resSeq: 338,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 400.0 Å3
d(Fe-oop): 0.000 Å
HIS chainID: C, resSeq: 483,
molecule: Hydroxylamine oxidoreductase
4n4n-C-607
sad. -0.30
ruf. -0.86
dom. -0.21
bre. -0.22
HIS chainID: C,
resSeq: 228,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 430.0 Å3
d(Fe-oop): 0.011 Å
HIS chainID: C, resSeq: 287,
molecule: Hydroxylamine oxidoreductase
4n4n-C-608
sad. +0.21
ruf. -0.94
dom. -0.23
bre. -0.21
HIS chainID: C,
resSeq: 303,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 404.0 Å3
d(Fe-oop): 0.007 Å
HIS chainID: C, resSeq: 388,
molecule: Hydroxylamine oxidoreductase
4n4n-E-601
sad. -0.09
ruf. -2.19
dom. +0.18
bre. +0.40
HIS chainID: C,
resSeq: 257,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 433.0 Å3
d(Fe-oop): 0.049 Å
HOH chainID: E, resSeq: 948,
molecule: water
4n4n-E-602
sad. +0.54
ruf. -0.46
dom. +0.32
bre. -0.22
HIS chainID: E,
resSeq: 267,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 425.0 Å3
d(Fe-oop): 0.013 Å
HIS chainID: E, resSeq: 347,
molecule: Hydroxylamine oxidoreductase
4n4n-E-603
sad. -0.21
ruf. -1.08
dom. -0.31
bre. -0.18
HIS chainID: E,
resSeq: 123,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 376.0 Å3
d(Fe-oop): 0.004 Å
HIS chainID: E, resSeq: 200,
molecule: Hydroxylamine oxidoreductase
4n4n-E-604
sad. +0.27
ruf. -0.71
dom. -0.00
bre. -0.28
HIS chainID: E,
resSeq: 107,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 414.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: E, resSeq: 184,
molecule: Hydroxylamine oxidoreductase
4n4n-E-605
sad. +0.46
ruf. -0.16
dom. +0.02
bre. -0.27
HIS chainID: E,
resSeq: 173,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 338.0 Å3
d(Fe-oop): 0.003 Å
HIS chainID: E, resSeq: 270,
molecule: Hydroxylamine oxidoreductase
4n4n-E-606
sad. +0.97
ruf. -1.14
dom. -0.26
bre. -0.10
HIS chainID: E,
resSeq: 338,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 380.0 Å3
d(Fe-oop): 0.001 Å
HIS chainID: E, resSeq: 483,
molecule: Hydroxylamine oxidoreductase
4n4n-E-607
sad. -0.39
ruf. -0.97
dom. -0.28
bre. -0.13
HIS chainID: E,
resSeq: 228,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 395.0 Å3
d(Fe-oop): 0.006 Å
HIS chainID: E, resSeq: 287,
molecule: Hydroxylamine oxidoreductase
4n4n-E-608
sad. +0.21
ruf. -0.96
dom. -0.17
bre. -0.16
HIS chainID: E,
resSeq: 303,
molecule: Hydroxylamine oxidoreductase
oxidoreductase
oligomeric count: 6
pocket vol.: 387.0 Å3
d(Fe-oop): 0.006 Å
HIS chainID: E, resSeq: 388,
molecule: Hydroxylamine oxidoreductase