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PyDISH No: 09095

PDB: 4m08,
chainID: E, resSeq: 301
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.799 Å

axial ligand #1: HIS

chainID: E,
resSeq: 160,
Coordination distance[Å]: 2.537
molecule: Chlorite dismutase
EC number: 1.13.11.49
Organism: Candidatus Nitrospira defluvii

axial ligand #2: IMD

chainID: E,
resSeq: 304,
Coordination distance[Å]: 2.543
molecule: IMIDAZOLE

List of other hemes in pdb:4m08

ID of heme Distortion Axial ligands on heme Function & structure
4m08-A-301
sad. -0.31
ruf. +0.46
dom. -0.16
bre. -0.27
HIS chainID: A,
resSeq: 160,
molecule: Chlorite dismutase
oxidoreductase
oligomeric count: 5
pocket vol.: 516.0 Å3
d(Fe-oop): 0.054 Å
IMD chainID: A, resSeq: 306,
molecule: IMIDAZOLE
4m08-B-301
sad. -0.54
ruf. +0.74
dom. -0.24
bre. -0.24
HIS chainID: B,
resSeq: 160,
molecule: Chlorite dismutase
oxidoreductase
oligomeric count: 5
pocket vol.: 476.0 Å3
d(Fe-oop): 0.016 Å
IMD chainID: B, resSeq: 305,
molecule: IMIDAZOLE
4m08-C-302
sad. -0.41
ruf. +0.73
dom. -0.06
bre. -0.24
HIS chainID: C,
resSeq: 160,
molecule: Chlorite dismutase
oxidoreductase
oligomeric count: 5
pocket vol.: 499.0 Å3
d(Fe-oop): 0.027 Å
IMD chainID: C, resSeq: 305,
molecule: IMIDAZOLE
4m08-D-301
sad. -0.29
ruf. +0.08
dom. -0.27
bre. -0.33
HIS chainID: D,
resSeq: 160,
molecule: Chlorite dismutase
oxidoreductase
oligomeric count: 5
pocket vol.: 486.0 Å3
d(Fe-oop): 0.088 Å
IMD chainID: D, resSeq: 304,
molecule: IMIDAZOLE