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PyDISH No: 08210

PDB: 4dl1,
chainID: J, resSeq: 202
heme type: B

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.0 Å

axial ligand #1: HIS

chainID: L,
resSeq: 336,
Coordination distance[Å]: 2.182
molecule: Myeloperoxidase heavy chain
EC number: 1.11.2.2
Organism: Homo sapiens

axial ligand #2: HOH

chainID: J,
resSeq: 302,
Coordination distance[Å]: 2.869
molecule: water

List of other hemes in pdb:4dl1

ID of heme Distortion Axial ligands on heme Function & structure
4dl1-C-601
sad. -1.13
ruf. -0.18
dom. -0.63
bre. -0.06
HIS chainID: C,
resSeq: 336,
molecule: Myeloperoxidase heavy chain
oxidoreductase
oligomeric count: 4
pocket vol.: 372.0 Å3
d(Fe-oop): 0.090 Å
HOH chainID: A, resSeq: 1701,
molecule: water
4dl1-B-202
sad. -1.04
ruf. -0.11
dom. -0.68
bre. -0.14
HIS chainID: D,
resSeq: 336,
molecule: Myeloperoxidase heavy chain
oxidoreductase
oligomeric count: 4
pocket vol.: 382.0 Å3
d(Fe-oop): 0.072 Å
HOH chainID: B, resSeq: 354,
molecule: water
4dl1-E-1602
sad. -0.94
ruf. -0.15
dom. -0.56
bre. -0.02
HIS chainID: G,
resSeq: 336,
molecule: Myeloperoxidase heavy chain
oxidoreductase
oligomeric count: 4
pocket vol.: 388.0 Å3
d(Fe-oop): 0.067 Å
HOH chainID: E, resSeq: 1703,
molecule: water
4dl1-F-202
sad. -1.17
ruf. +0.02
dom. -0.71
bre. -0.13
HIS chainID: H,
resSeq: 336,
molecule: Myeloperoxidase heavy chain
oxidoreductase
oligomeric count: 4
pocket vol.: 369.0 Å3
d(Fe-oop): 0.071 Å
HOH chainID: F, resSeq: 307,
molecule: water
4dl1-I-1602
sad. -0.94
ruf. -0.18
dom. -0.67
bre. -0.23
HIS chainID: K,
resSeq: 336,
molecule: Myeloperoxidase heavy chain
oxidoreductase
oligomeric count: 4
pocket vol.: 387.0 Å3
d(Fe-oop): 0.074 Å
HOH chainID: I, resSeq: 1770,
molecule: water
4dl1-M-1602
sad. -1.18
ruf. -0.23
dom. -0.64
bre. -0.12
HIS chainID: O,
resSeq: 336,
molecule: Myeloperoxidase heavy chain
oxidoreductase
oligomeric count: 4
pocket vol.: 389.0 Å3
d(Fe-oop): 0.079 Å
HOH chainID: M, resSeq: 1713,
molecule: water
4dl1-N-202
sad. -1.19
ruf. -0.04
dom. -0.63
bre. -0.16
HIS chainID: P,
resSeq: 336,
molecule: Myeloperoxidase heavy chain
oxidoreductase
oligomeric count: 4
pocket vol.: 375.0 Å3
d(Fe-oop): 0.068 Å
HOH chainID: N, resSeq: 307,
molecule: water