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PyDISH No: 07838

PDB: 3zoy,
chainID: A, resSeq: 1082
heme type: C

distortion

Protein data

function: oxidoreductase
experiment: X-RAY DIFFRACTION
resolution: 2.3 Å

axial ligand #1: HIS

chainID: A,
resSeq: 14,
Coordination distance[Å]: 1.932
molecule: CYTOCHROME C-552
EC number: 1.7.2.2
Organism: NITROSOMONAS EUROPAEA

axial ligand #2: MET

chainID: A,
resSeq: 59,
Coordination distance[Å]: 2.283
molecule: same as ligand #1

List of other hemes in pdb:3zoy

ID of heme Distortion Axial ligands on heme Function & structure
3zoy-B-1082
sad. -0.31
ruf. -0.76
dom. +0.04
bre. -0.30
HIS chainID: B,
resSeq: 14,
molecule: CYTOCHROME C-552
oxidoreductase
oligomeric count: 1
pocket vol.: 328.0 Å3
d(Fe-oop): 0.014 Å
MET chainID: B, resSeq: 59,
molecule: CYTOCHROME C-552
3zoy-C-1082
sad. -0.14
ruf. -0.87
dom. +0.06
bre. -0.20
HIS chainID: C,
resSeq: 14,
molecule: CYTOCHROME C-552
oxidoreductase
oligomeric count: 1
pocket vol.: 352.0 Å3
d(Fe-oop): 0.061 Å
MET chainID: C, resSeq: 59,
molecule: CYTOCHROME C-552
3zoy-D-1082
sad. -0.30
ruf. -0.82
dom. -0.04
bre. -0.13
HIS chainID: D,
resSeq: 14,
molecule: CYTOCHROME C-552
oxidoreductase
oligomeric count: 1
pocket vol.: 331.0 Å3
d(Fe-oop): 0.038 Å
MET chainID: D, resSeq: 59,
molecule: CYTOCHROME C-552